RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 SWAP70Q9UH65 585 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 PRKAB2O43741 272 aa17.97■□□□□ 0.47
LRRK1-211ENST00000538064 INHAP05111 366 aa17.97■□□□□ 0.47
LRRK1-211ENST00000538064 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
LRRK1-211ENST00000538064 RNF208Q9H0X6 261 aa17.97■□□□□ 0.47
LRRK1-211ENST00000538064 TXNRD2Q9NNW7 524 aa17.97■□□□□ 0.47
LRRK1-211ENST00000538064 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
LRRK1-211ENST00000538064 VCAM1P19320 739 aa17.96■□□□□ 0.47
LRRK1-211ENST00000538064 GJA8P48165 433 aa17.96■□□□□ 0.47
LRRK1-211ENST00000538064 ZYXQ15942 572 aaKnown RBP17.96■□□□□ 0.47
LRRK1-211ENST00000538064 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
LRRK1-211ENST00000538064 SLC44A5Q8NCS7 719 aa17.96■□□□□ 0.47
LRRK1-211ENST00000538064 GPRC5AQ8NFJ5 357 aa17.96■□□□□ 0.47
LRRK1-211ENST00000538064 UNC93B1Q9H1C4 597 aa17.96■□□□□ 0.47
LRRK1-211ENST00000538064 USP17L15C9J2P7 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L13C9JLJ4 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L11C9JVI0 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L18D6R9N7 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L22D6RA61 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L17D6RBQ6 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L19D6RCP7 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L20D6RJB6 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 ERVK-9P63128 1117 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 ERVK-24P63145 666 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L24Q0WX57 530 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 SEPT2Q15019 361 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 TMEM179Q6ZVK1 233 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 AMOTL1Q8IY63 956 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 PUS7LQ9H0K6 701 aaKnown RBP17.95■□□□□ 0.46
LRRK1-211ENST00000538064 RBPJLQ9UBG7 517 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 GJD2Q9UKL4 321 aa17.95■□□□□ 0.46
LRRK1-211ENST00000538064 ZNF236Q9UL36 1845 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 MPHOSPH10O00566 681 aaKnown RBP17.94■□□□□ 0.46
LRRK1-211ENST00000538064 C12orf60Q5U649 245 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 SOCS4Q8WXH5 440 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 SLC4A4Q9Y6R1 1079 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 TTC41PQ6P2S7 1318 aa17.94■□□□□ 0.46
LRRK1-211ENST00000538064 FRMPD3Q5JV73 1810 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 PEX10O60683 326 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 HMGCRP04035 888 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 MAPK4P31152 587 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 POTEEQ6S8J3 1075 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 LBX2Q6XYB7 198 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 CATSPERGQ6ZRH7 1159 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 C16orf86Q6ZW13 317 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 U2AF1L4Q8WU68 220 aaKnown RBP17.93■□□□□ 0.46
LRRK1-211ENST00000538064 PAGR1Q9BTK6 254 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 PAK6Q9NQU5 681 aaPredicted RBP17.93■□□□□ 0.46
LRRK1-211ENST00000538064 ARPP21Q9UBL0 812 aaPredicted RBP17.93■□□□□ 0.46
LRRK1-211ENST00000538064 RABGAP1Q9Y3P9 1069 aa17.93■□□□□ 0.46
LRRK1-211ENST00000538064 CYP2D7A0A087X1C5 515 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L12C9JPN9 530 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 USP17L21D6R901 530 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 SLC34A2O95436 690 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 AKR1B1P15121 316 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 CAPN2P17655 700 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 UBE2Q1Q7Z7E8 422 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 APPBP2Q92624 585 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 PORCNQ9H237 461 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 RPAP3Q9H6T3 665 aaPredicted RBP17.92■□□□□ 0.46
LRRK1-211ENST00000538064 CEP290O15078 2479 aa17.92■□□□□ 0.46
LRRK1-211ENST00000538064 ROBO3Q96MS0 1386 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 COL11A1P12107 1806 aaPredicted RBP17.91■□□□□ 0.46
LRRK1-211ENST00000538064 A0A1W2PRG0 241 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 SPDYE16A6NNV3 312 aaPredicted RBP17.91■□□□□ 0.46
LRRK1-211ENST00000538064 CNMDO75829 334 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 SGPL1O95470 568 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 ZFYP08048 801 aaPredicted RBP17.91■□□□□ 0.46
LRRK1-211ENST00000538064 CDK8P49336 464 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 ICA1Q05084 483 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 Q3C1V9 767 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 GPR142Q7Z601 462 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 CCDC17Q96LX7 622 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 STRBPQ96SI9 672 aaKnown RBP17.91■□□□□ 0.46
LRRK1-211ENST00000538064 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 NUDT12Q9BQG2 462 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 ALPK3Q96L96 1907 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 MYH4Q9Y623 1939 aa17.91■□□□□ 0.46
LRRK1-211ENST00000538064 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 ERC2O15083 957 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 RNF113AO15541 343 aaKnown RBP17.9■□□□□ 0.46
LRRK1-211ENST00000538064 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
LRRK1-211ENST00000538064 GIMAP6Q6P9H5 292 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 CTR9Q6PD62 1173 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 TRIB2Q92519 343 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 GCC1Q96CN9 775 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.9■□□□□ 0.46
LRRK1-211ENST00000538064 SH2D4AQ9H788 454 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 ARHGEF10LQ9HCE6 1279 aa17.9■□□□□ 0.46
LRRK1-211ENST00000538064 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
LRRK1-211ENST00000538064 FARP2O94887 1054 aaPredicted RBP17.89■□□□□ 0.45
LRRK1-211ENST00000538064 CCNA1P78396 465 aa17.89■□□□□ 0.45
LRRK1-211ENST00000538064 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
LRRK1-211ENST00000538064 PLEKHH3Q7Z736 793 aa17.89■□□□□ 0.45
LRRK1-211ENST00000538064 CLEC10AQ8IUN9 316 aa17.89■□□□□ 0.45
LRRK1-211ENST00000538064 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms