RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 APOBEC3HQ6NTF7 200 aaKnown RBP14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 HOXC10Q9NYD6 342 aa14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 SLX4Q8IY92 1834 aa14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 SP3Q02447 781 aa14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 CTCFLQ8NI51 663 aaPredicted RBP14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 EDC3Q96F86 508 aaKnown RBP14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 CCDC39Q9UFE4 941 aa14.13□□□□□ -0.15
TSPAN9-206ENST00000537971 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 CNGA1P29973 690 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 PPP4CP60510 307 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 CCDC83Q8IWF9 413 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 HHIPL1Q96JK4 782 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 CIZ1Q9ULV3 898 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 FAM196BA6NMK8 535 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 SLC1A4P43007 532 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 PRELPP51888 382 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 HMGCS2P54868 508 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 KCTD2Q14681 263 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 IDI2Q9BXS1 227 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 PDRG1Q9NUG6 133 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 RASSF10A6NK89 507 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 ITGBL1O95965 494 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 INPP5BP32019 993 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 ME1P48163 572 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 GCLCP48506 637 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 KRT32Q14532 448 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 NCAPG2Q86XI2 1143 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 PDILTQ8N807 584 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 CLIP2Q9UDT6 1046 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 ASTN2O75129 1339 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 AOX1Q06278 1338 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 TPM1P09493 284 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 NFIAQ12857 509 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 VGLL4Q14135 290 aa14.12□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L15C9J2P7 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L13C9JLJ4 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L11C9JVI0 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L18D6R9N7 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L22D6RA61 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L17D6RBQ6 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L19D6RCP7 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L20D6RJB6 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 IFIT3O14879 490 aaKnown RBP14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 USP17L24Q0WX57 530 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 STK38Q15208 465 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 NUCB1Q02818 461 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 CCDC173Q0VFZ6 552 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 BRDTQ58F21 947 aaPredicted RBP14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 CUL5Q93034 780 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 CCDC171Q6TFL3 1326 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 KRT85P78386 507 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
TSPAN9-206ENST00000537971 KIF5BP33176 963 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 CPXCR1Q8N123 301 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 FMR1Q06787 632 aaKnown RBP eCLIP14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 PRDM1O75626 825 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 TBC1D8O95759 1140 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 TFAP4Q01664 338 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 NMIQ13287 307 aaPredicted RBP14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 SLC51AQ86UW1 340 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 LCORLQ8N3X6 602 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 ZNF609O15014 1411 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 FLT1P17948 1338 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 SMC2O95347 1197 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 EGFRP00533 1210 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 GIMAP6Q6P9H5 292 aa14.1□□□□□ -0.15
TSPAN9-206ENST00000537971 CAMK4Q16566 473 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 SLC9C1Q4G0N8 1177 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 IFNL3Q8IZI9 196 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 TNMDQ9H2S6 317 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 SLC10A3P09131 477 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 CTU1Q7Z7A3 348 aaKnown RBP14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 PDHXO00330 501 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 SDSP20132 328 aa14.09□□□□□ -0.15
TSPAN9-206ENST00000537971 CAP2P40123 477 aa14.08□□□□□ -0.15
TSPAN9-206ENST00000537971 PPARAQ07869 468 aa14.08□□□□□ -0.15
TSPAN9-206ENST00000537971 BMP2KLQ5H9B9 411 aa14.08□□□□□ -0.15
TSPAN9-206ENST00000537971 MFSD14CQ5VZR4 134 aa14.08□□□□□ -0.15
TSPAN9-206ENST00000537971 NCOA7Q8NI08 942 aa14.08□□□□□ -0.15
TSPAN9-206ENST00000537971 PRKAG2Q9UGJ0 569 aa14.08□□□□□ -0.15
TSPAN9-206ENST00000537971 RPAP1Q9BWH6 1393 aaPredicted RBP14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 COPB2P35606 906 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 IFIT1BQ5T764 474 aaKnown RBP14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 CLMNQ96JQ2 1002 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 ZBTB21Q9ULJ3 1066 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 TNNT3P45378 269 aaPredicted RBP14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 MTMR2Q13614 643 aa14.08□□□□□ -0.16
TSPAN9-206ENST00000537971 SPDYE5A6NIY4 337 aa14.07□□□□□ -0.16
TSPAN9-206ENST00000537971 XBP1P17861 261 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms