RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 STK11IPQ8N1F8 1099 aa24.38■■□□□ 1.49
CHFR-209ENST00000535181 CFHR5Q9BXR6 569 aa24.38■■□□□ 1.49
CHFR-209ENST00000535181 RNF41Q9H4P4 317 aaPredicted RBP24.38■■□□□ 1.49
CHFR-209ENST00000535181 PRDM1O75626 825 aa24.37■■□□□ 1.49
CHFR-209ENST00000535181 HAND2P61296 217 aa24.37■■□□□ 1.49
CHFR-209ENST00000535181 AKNAD1Q5T1N1 836 aa24.37■■□□□ 1.49
CHFR-209ENST00000535181 ANKRD23Q86SG2 305 aa24.37■■□□□ 1.49
CHFR-209ENST00000535181 PROCA1Q8NCQ7 364 aaPredicted RBP24.37■■□□□ 1.49
CHFR-209ENST00000535181 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.37■■□□□ 1.49
CHFR-209ENST00000535181 LSG1Q9H089 658 aaKnown RBP24.37■■□□□ 1.49
CHFR-209ENST00000535181 KANSL2Q9H9L4 492 aa24.37■■□□□ 1.49
CHFR-209ENST00000535181 RNF186Q9NXI6 227 aa24.37■■□□□ 1.49
CHFR-209ENST00000535181 HSPA1AP0DMV8 641 aaKnown RBP24.36■■□□□ 1.49
CHFR-209ENST00000535181 HSPA1BP0DMV9 641 aaKnown RBP24.36■■□□□ 1.49
CHFR-209ENST00000535181 TBC1D10CQ8IV04 446 aa24.36■■□□□ 1.49
CHFR-209ENST00000535181 NEDD1Q8NHV4 660 aa24.36■■□□□ 1.49
CHFR-209ENST00000535181 KIAA1683Q9H0B3 1180 aa24.36■■□□□ 1.49
CHFR-209ENST00000535181 SLC45A1Q9Y2W3 748 aa24.36■■□□□ 1.49
CHFR-209ENST00000535181 TACC3Q9Y6A5 838 aa24.36■■□□□ 1.49
CHFR-209ENST00000535181 IGKV6D-41A0A0C4DH26 115 aa24.35■■□□□ 1.49
CHFR-209ENST00000535181 BTBD19C9JJ37 291 aa24.35■■□□□ 1.49
CHFR-209ENST00000535181 ICA1Q05084 483 aa24.35■■□□□ 1.49
CHFR-209ENST00000535181 MTMR2Q13614 643 aa24.35■■□□□ 1.49
CHFR-209ENST00000535181 MFSD6Q6ZSS7 791 aa24.35■■□□□ 1.49
CHFR-209ENST00000535181 C12orf42Q96LP6 360 aa24.35■■□□□ 1.49
CHFR-209ENST00000535181 TSPY3P0CV98 308 aa24.34■■□□□ 1.49
CHFR-209ENST00000535181 TSPY8P0CW00 308 aa24.34■■□□□ 1.49
CHFR-209ENST00000535181 USP14P54578 494 aa24.34■■□□□ 1.49
CHFR-209ENST00000535181 FAM43AQ8N2R8 423 aa24.34■■□□□ 1.49
CHFR-209ENST00000535181 SH2D4AQ9H788 454 aa24.34■■□□□ 1.49
CHFR-209ENST00000535181 ARHGEF10LQ9HCE6 1279 aa24.34■■□□□ 1.49
CHFR-209ENST00000535181 HMGCS2P54868 508 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 TFAP4Q01664 338 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 PPP4R3BQ5MIZ7 849 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 GPAT2Q6NUI2 795 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 USP17L2Q6R6M4 530 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 SIAH1Q8IUQ4 282 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 ACER1Q8TDN7 264 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 ANO2Q9NQ90 1003 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 AGTPBP1Q9UPW5 1226 aa24.33■■□□□ 1.49
CHFR-209ENST00000535181 RBM8AQ9Y5S9 174 aaKnown RBP24.33■■□□□ 1.49
CHFR-209ENST00000535181 TRPA1O75762 1119 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 CYP21A2P08686 494 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 GADL1Q6ZQY3 521 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 FEZ1Q99689 392 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 INCENPQ9NQS7 918 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 TMOD4Q9NZQ9 345 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 NYAP2Q9P242 653 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 SYNPO2Q9UMS6 1093 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 TMX2Q9Y320 296 aa24.32■■□□□ 1.48
CHFR-209ENST00000535181 A0A1W2PRG0 241 aa24.31■■□□□ 1.48
CHFR-209ENST00000535181 TSPY2A6NKD2 308 aa24.31■■□□□ 1.48
CHFR-209ENST00000535181 NOM1Q5C9Z4 860 aaKnown RBP24.31■■□□□ 1.48
CHFR-209ENST00000535181 MTMR4Q9NYA4 1195 aa24.31■■□□□ 1.48
CHFR-209ENST00000535181 NEDD4P46934 1319 aa24.31■■□□□ 1.48
CHFR-209ENST00000535181 FOXN1O15353 648 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 RANBP6O60518 1105 aaKnown RBP24.3■■□□□ 1.48
CHFR-209ENST00000535181 EEF2P13639 858 aaKnown RBP24.3■■□□□ 1.48
CHFR-209ENST00000535181 NOVP48745 357 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 PABPC4Q13310 644 aaKnown RBP eCLIP24.3■■□□□ 1.48
CHFR-209ENST00000535181 FAM47AQ5JRC9 791 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 CLEC10AQ8IUN9 316 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 ESR2Q92731 530 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 CEP95Q96GE4 821 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 CNNM2Q9H8M5 875 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 EMILIN3Q9NT22 766 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 TCP11L1Q9NUJ3 509 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 GTF3C3Q9Y5Q9 886 aa24.3■■□□□ 1.48
CHFR-209ENST00000535181 PDHXO00330 501 aa24.29■■□□□ 1.48
CHFR-209ENST00000535181 EPB41L2O43491 1005 aaKnown RBP24.29■■□□□ 1.48
CHFR-209ENST00000535181 CTCFP49711 727 aaPredicted RBP24.29■■□□□ 1.48
CHFR-209ENST00000535181 MKL1Q969V6 931 aa24.29■■□□□ 1.48
CHFR-209ENST00000535181 KRT23Q9C075 422 aa24.29■■□□□ 1.48
CHFR-209ENST00000535181 TOMM22Q9NS69 142 aa24.29■■□□□ 1.48
CHFR-209ENST00000535181 REC8O95072 547 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 TTLL1O95922 423 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 HOXA7P31268 230 aaPredicted RBP24.28■■□□□ 1.48
CHFR-209ENST00000535181 DGKZQ13574 1117 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 NECTIN1Q15223 517 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 TAF1CQ15572 869 aaPredicted RBP24.28■■□□□ 1.48
CHFR-209ENST00000535181 RRP12Q5JTH9 1297 aaKnown RBP24.28■■□□□ 1.48
CHFR-209ENST00000535181 TREML2Q5T2D2 321 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 LPAR1Q92633 364 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 PARK7Q99497 189 aaKnown RBP24.28■■□□□ 1.48
CHFR-209ENST00000535181 ZFYVE28Q9HCC9 887 aa24.28■■□□□ 1.48
CHFR-209ENST00000535181 MYH4Q9Y623 1939 aa24.27■■□□□ 1.48
CHFR-209ENST00000535181 HSPA8P11142 646 aaKnown RBP24.27■■□□□ 1.48
CHFR-209ENST00000535181 CRHR2Q13324 411 aa24.27■■□□□ 1.48
CHFR-209ENST00000535181 VCPKMTQ9H867 229 aa24.27■■□□□ 1.48
CHFR-209ENST00000535181 IL17RBQ9NRM6 502 aa24.27■■□□□ 1.48
CHFR-209ENST00000535181 PNMA3Q9UL41 463 aa24.27■■□□□ 1.48
CHFR-209ENST00000535181 VCAM1P19320 739 aa24.26■■□□□ 1.47
CHFR-209ENST00000535181 TBC1D8O95759 1140 aa24.25■■□□□ 1.47
CHFR-209ENST00000535181 ATP2B2Q01814 1243 aa24.25■■□□□ 1.47
CHFR-209ENST00000535181 TRDNQ13061 729 aa24.25■■□□□ 1.47
CHFR-209ENST00000535181 ZYXQ15942 572 aaKnown RBP24.25■■□□□ 1.47
CHFR-209ENST00000535181 CREB3L3Q68CJ9 461 aa24.25■■□□□ 1.47
CHFR-209ENST00000535181 GOPCQ9HD26 462 aa24.25■■□□□ 1.47
CHFR-209ENST00000535181 ADGRA2Q96PE1 1338 aa24.25■■□□□ 1.47
CHFR-209ENST00000535181 B4E1Z4 1266 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms