RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
CAPN1-228ENST00000534373 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
CAPN1-228ENST00000534373 TMEM179Q6ZVK1 233 aa16.13■□□□□ 0.17
CAPN1-228ENST00000534373 KBTBD3Q8NAB2 608 aa16.13■□□□□ 0.17
CAPN1-228ENST00000534373 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
CAPN1-228ENST00000534373 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
CAPN1-228ENST00000534373 DDX60LQ5H9U9 1706 aaKnown RBP16.13■□□□□ 0.17
CAPN1-228ENST00000534373 PRKAB2O43741 272 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 SGPL1O95470 568 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 INHAP05111 366 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 XRCC5P13010 732 aaKnown RBP16.12■□□□□ 0.17
CAPN1-228ENST00000534373 ELNP15502 786 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 ERVK-24P63145 666 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 SEPT2Q15019 361 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 LBX2Q6XYB7 198 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 ACER1Q8TDN7 264 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
CAPN1-228ENST00000534373 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
CAPN1-228ENST00000534373 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 USP17L21D6R901 530 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 HMGCRP04035 888 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 ZFYP08048 801 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 VCAM1P19320 739 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 CCNA1P78396 465 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 Q3C1V9 767 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 GIMAP6Q6P9H5 292 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 PAK6Q9NQU5 681 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-228ENST00000534373 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
CAPN1-228ENST00000534373 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 ERC2O15083 957 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 SLC34A2O95436 690 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 CYP2D6P10635 497 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 ZYXQ15942 572 aaKnown RBP16.1■□□□□ 0.17
CAPN1-228ENST00000534373 UBE2Q1Q7Z7E8 422 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 STRBPQ96SI9 672 aaKnown RBP16.1■□□□□ 0.17
CAPN1-228ENST00000534373 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 HOXC10Q9NYD6 342 aa16.1■□□□□ 0.17
CAPN1-228ENST00000534373 RNF113AO15541 343 aaKnown RBP16.09■□□□□ 0.17
CAPN1-228ENST00000534373 GLRX3O76003 335 aaKnown RBP16.09■□□□□ 0.17
CAPN1-228ENST00000534373 CDK8P49336 464 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 EVX2Q03828 476 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 COG2Q14746 738 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 SBK1Q52WX2 424 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 C16orf86Q6ZW13 317 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 APPBP2Q92624 585 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 LPAR1Q92633 364 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 PAGR1Q9BTK6 254 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 ARPP21Q9UBL0 812 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-228ENST00000534373 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
CAPN1-228ENST00000534373 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 CHGBP05060 677 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 GNAT2P19087 354 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 AAMPQ13685 434 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 CTR9Q6PD62 1173 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 GPR142Q7Z601 462 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 PLEKHH3Q7Z736 793 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 USP6NLQ92738 828 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 HTATIP2Q9BUP3 242 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-228ENST00000534373 TMX2Q9Y320 296 aa16.08■□□□□ 0.16
CAPN1-228ENST00000534373 MYH7P12883 1935 aa16.07■□□□□ 0.16
CAPN1-228ENST00000534373 TFRCP02786 760 aaKnown RBP16.07■□□□□ 0.16
CAPN1-228ENST00000534373 RGS2P41220 211 aa16.07■□□□□ 0.16
CAPN1-228ENST00000534373 MORN1Q5T089 497 aa16.07■□□□□ 0.16
CAPN1-228ENST00000534373 DEFB118Q96PH6 123 aa16.07■□□□□ 0.16
CAPN1-228ENST00000534373 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.16
CAPN1-228ENST00000534373 PORCNQ9H237 461 aa16.07■□□□□ 0.16
CAPN1-228ENST00000534373 KANSL2Q9H9L4 492 aa16.07■□□□□ 0.16
CAPN1-228ENST00000534373 HMX1Q9NP08 348 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-228ENST00000534373 SPDYE16A6NNV3 312 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-228ENST00000534373 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 PEX10O60683 326 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 CNMDO75829 334 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 AKR1B1P15121 316 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 CYP2B6P20813 491 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 ICA1Q05084 483 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 MB21D1Q8N884 522 aa16.06■□□□□ 0.16
CAPN1-228ENST00000534373 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms