RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 FKBP1BP68106 108 aa12.04□□□□□ -0.48
CAPRIN1-215ENST00000533657 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
CAPRIN1-215ENST00000533657 ZSCAN31Q96LW9 406 aaPredicted RBP12.04□□□□□ -0.48
CAPRIN1-215ENST00000533657 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPRIN1-215ENST00000533657 LY9Q9HBG7 655 aa12.04□□□□□ -0.48
CAPRIN1-215ENST00000533657 CTNND1O60716 968 aaKnown RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 NBPF12Q5TAG4 269 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 MKL1Q969V6 931 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 CHMP4CQ96CF2 233 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 CDCA5Q96FF9 252 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 CAP2P40123 477 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 AK2P54819 239 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 TFAP4Q01664 338 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 NYAP2Q9P242 653 aa12.03□□□□□ -0.48
CAPRIN1-215ENST00000533657 TSPY2A6NKD2 308 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 DYNC1I1O14576 645 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 PPP2R5BQ15173 497 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 CHADLQ6NUI6 762 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 Q6ZUG5 572 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 UBAC1Q9BSL1 405 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 NMRK2Q9NPI5 230 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 INCENPQ9NQS7 918 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.48
CAPRIN1-215ENST00000533657 TNKSO95271 1327 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 PTPRFP10586 1907 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 ERICH2A1L162 156 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 ADM5C9JUS6 153 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 RANBP6O60518 1105 aaKnown RBP12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 DDAH1O94760 285 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 AKR1B1P15121 316 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 ABCB5Q2M3G0 1257 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 ENAHQ8N8S7 591 aaPredicted RBP12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 KLRG1Q96E93 195 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 KANSL2Q9H9L4 492 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 GOLGB1Q14789 3259 aaKnown RBP12.02□□□□□ -0.49
CAPRIN1-215ENST00000533657 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 NF2P35240 595 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 EAPPQ56P03 285 aaPredicted RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 ZSCAN30Q86W11 494 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 ARID3AQ99856 593 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 MTMR4Q9NYA4 1195 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 IFIT3O14879 490 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 PRDM1O75626 825 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 ASNSP08243 561 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 WTAPQ15007 396 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 TMEM67Q5HYA8 995 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 R3HCC1Q9Y3T6 440 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 UQCRHLA0A096LP55 91 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 UQCRHP07919 91 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 CALM1P0DP23 149 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 CALM2P0DP24 149 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 CALM3P0DP25 149 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 TOP1P11387 765 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 CUL4AQ13619 759 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 RRP12Q5JTH9 1297 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 DNTTIP2Q5QJE6 756 aaKnown RBP12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 CABP5Q9NP86 173 aa12.01□□□□□ -0.49
CAPRIN1-215ENST00000533657 KIF3CO14782 793 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 TTLL1O95922 423 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 CPA1P15085 419 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 MCM4P33991 863 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 DHX37Q8IY37 1157 aaKnown RBP12□□□□□ -0.49
CAPRIN1-215ENST00000533657 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
CAPRIN1-215ENST00000533657 WDR18Q9BV38 432 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 TOMM22Q9NS69 142 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 PASKQ96RG2 1323 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 TRAK2O60296 914 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 PFKFB2O60825 505 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
CAPRIN1-215ENST00000533657 FAM47AQ5JRC9 791 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 HSCBQ8IWL3 235 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 GMCL1P1Q8NEA9 526 aa12□□□□□ -0.49
CAPRIN1-215ENST00000533657 GLIS2Q9BZE0 524 aaPredicted RBP12□□□□□ -0.49
CAPRIN1-215ENST00000533657 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
CAPRIN1-215ENST00000533657 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
CAPRIN1-215ENST00000533657 ITGBL1O95965 494 aaPredicted RBP11.99□□□□□ -0.49
CAPRIN1-215ENST00000533657 SNHG28P0DPA3 235 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms