RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 GABPAQ06546 454 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 USP17L24Q0WX57 530 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 SDR42E1Q8WUS8 393 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 DPF3Q92784 378 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 C12orf42Q96LP6 360 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 RBPJLQ9UBG7 517 aa14.98□□□□□ -0.01
CAPRIN1-213ENST00000533562 MPHOSPH10O00566 681 aaKnown RBP14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 HMGCRP04035 888 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 ERVK-9P63128 1117 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 ERVK-24P63145 666 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 UBE3CQ15386 1083 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 ZYXQ15942 572 aaKnown RBP14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 AMOTL1Q8IY63 956 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 DEFB118Q96PH6 123 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 HTATIP2Q9BUP3 242 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 ARMT1Q9H993 441 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 TXNRD2Q9NNW7 524 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 SWAP70Q9UH65 585 aa14.97□□□□□ -0.01
CAPRIN1-213ENST00000533562 SMARCA5O60264 1052 aaPredicted RBP14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 MBD4O95243 580 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 CCNA1P78396 465 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 Q3C1V9 767 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 ACER1Q8TDN7 264 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 SOCS4Q8WXH5 440 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 PAGR1Q9BTK6 254 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 CWC22Q9HCG8 908 aaKnown RBP14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 PAK6Q9NQU5 681 aaPredicted RBP14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 ECHDC1Q9NTX5 307 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 RABGAP1Q9Y3P9 1069 aa14.96□□□□□ -0.01
CAPRIN1-213ENST00000533562 FARP2O94887 1054 aaPredicted RBP14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 XRCC5P13010 732 aaKnown RBP14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 VCAM1P19320 739 aa14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 CYP2B6P20813 491 aa14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 SEPT2Q15019 361 aa14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 UBE2Q1Q7Z7E8 422 aa14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 TRMT44Q8IYL2 757 aaKnown RBP14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 HMX1Q9NP08 348 aaPredicted RBP14.95□□□□□ -0.02
CAPRIN1-213ENST00000533562 RPTORQ8N122 1335 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 PRKAB2O43741 272 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 PEX10O60683 326 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 GLRX3O76003 335 aaKnown RBP14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 GUCY1A2P33402 732 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 SLFNL1Q499Z3 407 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 HABP4Q5JVS0 413 aaKnown RBP14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 PLEKHH3Q7Z736 793 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 HOXC10Q9NYD6 342 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 SLC4A4Q9Y6R1 1079 aa14.94□□□□□ -0.02
CAPRIN1-213ENST00000533562 RANBP2P49792 3224 aaKnown RBP14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 H0YGN5 161 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 CYP2D6P10635 497 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 RGS2P41220 211 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 C12orf60Q5U649 245 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 LBX2Q6XYB7 198 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 GPR142Q7Z601 462 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 CCDC17Q96LX7 622 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 CRISPLD2Q9H0B8 497 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 PORCNQ9H237 461 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 RPAP3Q9H6T3 665 aaPredicted RBP14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 NR2E3Q9Y5X4 410 aa14.93□□□□□ -0.02
CAPRIN1-213ENST00000533562 USP17L12C9JPN9 530 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 USP17L21D6R901 530 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 COG2Q14746 738 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 POTEEQ6S8J3 1075 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 SLC44A5Q8NCS7 719 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 TRIB2Q92519 343 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 PUS7LQ9H0K6 701 aaKnown RBP14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 ARHGEF10LQ9HCE6 1279 aa14.92□□□□□ -0.02
CAPRIN1-213ENST00000533562 TRIOBPQ9H2D6 2365 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 A0A1W2PRG0 241 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 ZKSCAN1P17029 563 aaPredicted RBP14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 CDK8P49336 464 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 EVX2Q03828 476 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 LRRFIP1Q32MZ4 808 aaKnown RBP14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 MORN1Q5T089 497 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 NECAB2Q7Z6G3 386 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 KBTBD3Q8NAB2 608 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 ANKLE1Q8NAG6 615 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 LPAR1Q92633 364 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 USP6NLQ92738 828 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 PCDH10Q9P2E7 1040 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 IVNS1ABPQ9Y6Y0 642 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
CAPRIN1-213ENST00000533562 SPDYE16A6NNV3 312 aaPredicted RBP14.9□□□□□ -0.02
CAPRIN1-213ENST00000533562 CNMDO75829 334 aa14.9□□□□□ -0.02
CAPRIN1-213ENST00000533562 CHGBP05060 677 aa14.9□□□□□ -0.02
CAPRIN1-213ENST00000533562 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
CAPRIN1-213ENST00000533562 TRIM32Q13049 653 aa14.9□□□□□ -0.02
CAPRIN1-213ENST00000533562 WDR78Q5VTH9 848 aa14.9□□□□□ -0.02
CAPRIN1-213ENST00000533562 CTR9Q6PD62 1173 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms