RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RAPGEF1Q13905 1077 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 ARID5BQ14865 1188 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 ERCC6LQ2NKX8 1250 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.21
BDNF-218ENST00000533246 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 GOLGA1Q92805 767 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 SYNRGQ9UMZ2 1314 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 INF2Q27J81 1249 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 NELFCDQ8IXH7 590 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 CEP120Q8N960 986 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 TACC1O75410 805 aa13.71□□□□□ -0.22
BDNF-218ENST00000533246 SMIM5Q71RC9 77 aa13.71□□□□□ -0.22
BDNF-218ENST00000533246 ARMCX6Q7L4S7 300 aa13.71□□□□□ -0.22
BDNF-218ENST00000533246 CNGA4Q8IV77 575 aa13.71□□□□□ -0.22
BDNF-218ENST00000533246 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.22
BDNF-218ENST00000533246 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.22
BDNF-218ENST00000533246 TRIM66O15016 1216 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 SETSIPP0DME0 302 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 CMA1P23946 247 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 SV2BQ7L1I2 683 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 IFT81Q8WYA0 676 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
BDNF-218ENST00000533246 ATP2C2O75185 946 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 SCNN1DP51172 638 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 TOB2Q14106 344 aaPredicted RBP13.7□□□□□ -0.22
BDNF-218ENST00000533246 USH1GQ495M9 461 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
BDNF-218ENST00000533246 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 WDR66Q8TBY9 1149 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 RABEP2Q9H5N1 569 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
BDNF-218ENST00000533246 LRWD1Q9UFC0 647 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 KIF1CO43896 1103 aaKnown RBP13.7□□□□□ -0.22
BDNF-218ENST00000533246 PAK1Q13153 545 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 PTGDRQ13258 359 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 PNMA1Q8ND90 353 aa13.7□□□□□ -0.22
BDNF-218ENST00000533246 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 PAF1Q8N7H5 531 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 FAM207AQ9NSI2 230 aaPredicted RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 PEX19P40855 299 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 LRRC8AQ8IWT6 810 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 ZSCAN10Q96SZ4 725 aaPredicted RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 VPS18Q9P253 973 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 CARMIL3Q8ND23 1372 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 WDHD1O75717 1129 aaPredicted RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 KRT83P78385 493 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 SLC20A2Q08357 652 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 UBE3CQ15386 1083 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 FMNL3Q8IVF7 1028 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 SNX29Q8TEQ0 813 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 BICD1Q96G01 975 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 NLRC4Q9NPP4 1024 aa13.69□□□□□ -0.22
BDNF-218ENST00000533246 RRP15Q9Y3B9 282 aaKnown RBP13.69□□□□□ -0.22
BDNF-218ENST00000533246 H7C1W4 665 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 GCKP35557 465 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 SLC1A4P43007 532 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 MCAMP43121 646 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 RASGRF1Q13972 1273 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 NAA15Q9BXJ9 866 aaKnown RBP13.68□□□□□ -0.22
BDNF-218ENST00000533246 TMEM110-MUSTN1A8MSY1 372 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 ADD2P35612 726 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 SCARF1Q14162 830 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 CPXCR1Q8N123 301 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 LRRC47Q8N1G4 583 aaKnown RBP13.68□□□□□ -0.22
BDNF-218ENST00000533246 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 LRRC27Q9C0I9 530 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 FRMPD2Q68DX3 1309 aaPredicted RBP13.68□□□□□ -0.22
BDNF-218ENST00000533246 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 NONOQ15233 471 aaKnown RBP eCLIP13.68□□□□□ -0.22
BDNF-218ENST00000533246 PTPROQ16827 1216 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 SPECC1LQ69YQ0 1117 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 EHBP1Q8NDI1 1231 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 NELFBQ8WX92 580 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 ZMYM6O95789 1325 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
BDNF-218ENST00000533246 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 NBPF26B4DH59 902 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 ARHGAP6O43182 974 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 ATP1A3P13637 1013 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 GJC1P36383 396 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 PLCD1P51178 756 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms