RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 ARMT1Q9H993 441 aa10.56□□□□□ -0.72
SOX9-AS1-210ENST00000533039 DCP1AQ9NPI6 582 aaPredicted RBP10.56□□□□□ -0.72
SOX9-AS1-210ENST00000533039 ATP8A2Q9NTI2 1148 aa10.56□□□□□ -0.72
SOX9-AS1-210ENST00000533039 ECHDC1Q9NTX5 307 aa10.56□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 MPHOSPH10O00566 681 aaKnown RBP10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 INHAP05111 366 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SHMT1P34896 483 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 UBE3CQ15386 1083 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 C12orf42Q96LP6 360 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 KIAA1683Q9H0B3 1180 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 DCTPP1Q9H773 170 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 EMILIN3Q9NT22 766 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
SOX9-AS1-210ENST00000533039 BRCA2P51587 3418 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 PARP14Q460N5 1801 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SLC34A2O95436 690 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 MAPK4P31152 587 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 CCNA1P78396 465 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 GABPAQ06546 454 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SOCS4Q8WXH5 440 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 NUDT12Q9BQG2 462 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 PAGR1Q9BTK6 254 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 UNC93B1Q9H1C4 597 aa10.54□□□□□ -0.72
SOX9-AS1-210ENST00000533039 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 MYH4Q9Y623 1939 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SGPL1O95470 568 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 TFRCP02786 760 aaKnown RBP10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 HMGCRP04035 888 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 ERVK-24P63145 666 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SEPT2Q15019 361 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 TMEM179Q6ZVK1 233 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 HTATIP2Q9BUP3 242 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SH2D4AQ9H788 454 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 RBPJLQ9UBG7 517 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 SLC4A4Q9Y6R1 1079 aa10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 COL11A1P12107 1806 aaPredicted RBP10.53□□□□□ -0.72
SOX9-AS1-210ENST00000533039 ZNFX1Q9P2E3 1918 aaKnown RBP10.52□□□□□ -0.72
SOX9-AS1-210ENST00000533039 FRMPD3Q5JV73 1810 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 USP17L12C9JPN9 530 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 USP17L21D6R901 530 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 PRKAB2O43741 272 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 FARP2O94887 1054 aaPredicted RBP10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 CYP2D6P10635 497 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 VCAM1P19320 739 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 CYP2B6P20813 491 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 GUCY1A2P33402 732 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 LRRFIP1Q32MZ4 808 aaKnown RBP10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 SLFNL1Q499Z3 407 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 C12orf60Q5U649 245 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 CATSPERGQ6ZRH7 1159 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 TRMT44Q8IYL2 757 aaKnown RBP10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 ACER1Q8TDN7 264 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 DPF3Q92784 378 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 CCDC17Q96LX7 622 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 DEFB118Q96PH6 123 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 RPAP3Q9H6T3 665 aaPredicted RBP10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 ARHGEF10LQ9HCE6 1279 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 HMX1Q9NP08 348 aaPredicted RBP10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 RLFQ13129 1914 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 A0A0G2JMZ2 1700 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 RPTORQ8N122 1335 aa10.52□□□□□ -0.73
SOX9-AS1-210ENST00000533039 ERC2O15083 957 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 PEX10O60683 326 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 ZFYP08048 801 aaPredicted RBP10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 RGS2P41220 211 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 Q3C1V9 767 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 WDR78Q5VTH9 848 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 LHX8Q68G74 356 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 GPR142Q7Z601 462 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 PLEKHH3Q7Z736 793 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 SLC44A5Q8NCS7 719 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 DYNLL2Q96FJ2 89 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 PUS7LQ9H0K6 701 aaKnown RBP10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 HOXC10Q9NYD6 342 aa10.51□□□□□ -0.73
SOX9-AS1-210ENST00000533039 ARPP21Q9UBL0 812 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms