RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 FGRP09769 529 aa29.46■■■□□ 2.31
USP48-214ENST00000532737 CLEC10AQ8IUN9 316 aa29.46■■■□□ 2.31
USP48-214ENST00000532737 TBC1D10CQ8IV04 446 aa29.46■■■□□ 2.31
USP48-214ENST00000532737 ACER1Q8TDN7 264 aa29.46■■■□□ 2.31
USP48-214ENST00000532737 LSG1Q9H089 658 aaKnown RBP29.46■■■□□ 2.31
USP48-214ENST00000532737 RGS19P49795 217 aa29.45■■■□□ 2.31
USP48-214ENST00000532737 DGKZQ13574 1117 aa29.45■■■□□ 2.31
USP48-214ENST00000532737 KIAA1211Q6ZU35 1233 aa29.45■■■□□ 2.31
USP48-214ENST00000532737 SIAH1Q8IUQ4 282 aa29.45■■■□□ 2.31
USP48-214ENST00000532737 MAP4K1Q92918 833 aa29.45■■■□□ 2.31
USP48-214ENST00000532737 GTF3C3Q9Y5Q9 886 aa29.45■■■□□ 2.31
USP48-214ENST00000532737 BTBD19C9JJ37 291 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 ORC4O43929 436 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 TRPA1O75762 1119 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 BACE1P56817 501 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 MTMR2Q13614 643 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 FAM47AQ5JRC9 791 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 FAM43AQ8N2R8 423 aa29.44■■■□□ 2.3
USP48-214ENST00000532737 U3KPZ7 1027 aaPredicted RBP29.44■■■□□ 2.3
USP48-214ENST00000532737 USP17L10C9JJH3 530 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 HMGCS2P54868 508 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 TFAP4Q01664 338 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 IMMTQ16891 758 aaKnown RBP29.43■■■□□ 2.3
USP48-214ENST00000532737 SH3D19Q5HYK7 790 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 AKNAD1Q5T1N1 836 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 GPAT2Q6NUI2 795 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 GADL1Q6ZQY3 521 aa29.43■■■□□ 2.3
USP48-214ENST00000532737 FASTKD5Q7L8L6 764 aaKnown RBP29.43■■■□□ 2.3
USP48-214ENST00000532737 A0A1W2PRG0 241 aa29.42■■■□□ 2.3
USP48-214ENST00000532737 OTUD7BQ6GQQ9 843 aa29.42■■■□□ 2.3
USP48-214ENST00000532737 NEDD1Q8NHV4 660 aa29.42■■■□□ 2.3
USP48-214ENST00000532737 STAG1Q8WVM7 1258 aa29.42■■■□□ 2.3
USP48-214ENST00000532737 ANO2Q9NQ90 1003 aa29.42■■■□□ 2.3
USP48-214ENST00000532737 ICA1Q05084 483 aa29.41■■■□□ 2.3
USP48-214ENST00000532737 MFSD6Q6ZSS7 791 aa29.41■■■□□ 2.3
USP48-214ENST00000532737 ANKRD23Q86SG2 305 aa29.41■■■□□ 2.3
USP48-214ENST00000532737 NKX2-3Q8TAU0 364 aa29.41■■■□□ 2.3
USP48-214ENST00000532737 KANSL2Q9H9L4 492 aa29.41■■■□□ 2.3
USP48-214ENST00000532737 RBM8AQ9Y5S9 174 aaKnown RBP29.41■■■□□ 2.3
USP48-214ENST00000532737 MYH8P13535 1937 aa29.41■■■□□ 2.3
USP48-214ENST00000532737 IGKV6D-41A0A0C4DH26 115 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 C19orf81C9J6K1 198 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 ALDH1A1P00352 501 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 TSPY3P0CV98 308 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 TSPY8P0CW00 308 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 RRP12Q5JTH9 1297 aaKnown RBP29.4■■■□□ 2.3
USP48-214ENST00000532737 FEZ1Q99689 392 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 KIAA1683Q9H0B3 1180 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 TOMM22Q9NS69 142 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 EMILIN3Q9NT22 766 aa29.4■■■□□ 2.3
USP48-214ENST00000532737 RANBP6O60518 1105 aaKnown RBP29.39■■■□□ 2.3
USP48-214ENST00000532737 CYP21A2P08686 494 aa29.39■■■□□ 2.3
USP48-214ENST00000532737 PCP11498 1178 aaKnown RBP29.39■■■□□ 2.3
USP48-214ENST00000532737 EEF2P13639 858 aaKnown RBP29.39■■■□□ 2.3
USP48-214ENST00000532737 RNF41Q9H4P4 317 aaPredicted RBP29.39■■■□□ 2.3
USP48-214ENST00000532737 TBC1D8O95759 1140 aa29.38■■■□□ 2.29
USP48-214ENST00000532737 ZYXQ15942 572 aaKnown RBP29.38■■■□□ 2.29
USP48-214ENST00000532737 TREML2Q5T2D2 321 aa29.38■■■□□ 2.29
USP48-214ENST00000532737 USP17L2Q6R6M4 530 aa29.38■■■□□ 2.29
USP48-214ENST00000532737 PROCA1Q8NCQ7 364 aaPredicted RBP29.38■■■□□ 2.29
USP48-214ENST00000532737 R3HDMLQ9H3Y0 253 aa29.38■■■□□ 2.29
USP48-214ENST00000532737 TAF6LQ9Y6J9 622 aa29.38■■■□□ 2.29
USP48-214ENST00000532737 NEDD4P46934 1319 aa29.38■■■□□ 2.29
USP48-214ENST00000532737 TSPY2A6NKD2 308 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 PDHXO00330 501 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 ATP2B2Q01814 1243 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 CEP95Q96GE4 821 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 ARHGEF10LQ9HCE6 1279 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 ZCCHC17Q9NP64 241 aaKnown RBP29.37■■■□□ 2.29
USP48-214ENST00000532737 TMOD4Q9NZQ9 345 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 AGTPBP1Q9UPW5 1226 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 TMX2Q9Y320 296 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 PLIN4Q96Q06 1357 aa29.37■■■□□ 2.29
USP48-214ENST00000532737 PTPRFP10586 1907 aa29.36■■■□□ 2.29
USP48-214ENST00000532737 MLLT1Q03111 559 aaPredicted RBP29.36■■■□□ 2.29
USP48-214ENST00000532737 MTMR4Q9NYA4 1195 aa29.36■■■□□ 2.29
USP48-214ENST00000532737 GREB1LQ9C091 1923 aaPredicted RBP29.35■■■□□ 2.29
USP48-214ENST00000532737 USP14P54578 494 aa29.35■■■□□ 2.29
USP48-214ENST00000532737 CRHR2Q13324 411 aa29.35■■■□□ 2.29
USP48-214ENST00000532737 TAF1CQ15572 869 aaPredicted RBP29.35■■■□□ 2.29
USP48-214ENST00000532737 C12orf42Q96LP6 360 aa29.35■■■□□ 2.29
USP48-214ENST00000532737 CFHR5Q9BXR6 569 aa29.35■■■□□ 2.29
USP48-214ENST00000532737 IL17RBQ9NRM6 502 aa29.35■■■□□ 2.29
USP48-214ENST00000532737 NYAP2Q9P242 653 aa29.35■■■□□ 2.29
USP48-214ENST00000532737 LAMA4Q16363 1823 aa29.34■■■□□ 2.29
USP48-214ENST00000532737 NMT2O60551 498 aa29.34■■■□□ 2.29
USP48-214ENST00000532737 NECTIN1Q15223 517 aa29.34■■■□□ 2.29
USP48-214ENST00000532737 TNRC18O15417 2968 aaPredicted RBP29.34■■■□□ 2.29
USP48-214ENST00000532737 KIAA1755Q5JYT7 1200 aa29.33■■■□□ 2.29
USP48-214ENST00000532737 ESR2Q92731 530 aa29.33■■■□□ 2.29
USP48-214ENST00000532737 SH2D4AQ9H788 454 aa29.33■■■□□ 2.29
USP48-214ENST00000532737 CLIP2Q9UDT6 1046 aa29.33■■■□□ 2.29
USP48-214ENST00000532737 SLC45A1Q9Y2W3 748 aa29.33■■■□□ 2.29
USP48-214ENST00000532737 B4E1Z4 1266 aa29.32■■■□□ 2.28
USP48-214ENST00000532737 SLC27A2O14975 620 aa29.32■■■□□ 2.28
USP48-214ENST00000532737 ZFYVE28Q9HCC9 887 aa29.32■■■□□ 2.28
USP48-214ENST00000532737 KDM4AO75164 1064 aa29.31■■■□□ 2.28
USP48-214ENST00000532737 TTLL1O95922 423 aa29.31■■■□□ 2.28
USP48-214ENST00000532737 CYP2C8P10632 490 aa29.31■■■□□ 2.28
USP48-214ENST00000532737 CREB3L3Q68CJ9 461 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms