RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 EXOC6Q8TAG9 804 aa22.86■■□□□ 1.25
SSH3-209ENST00000532600 PXYLP1Q8TE99 480 aa22.86■■□□□ 1.25
SSH3-209ENST00000532600 KIAA1683Q9H0B3 1180 aa22.86■■□□□ 1.25
SSH3-209ENST00000532600 UNC93B1Q9H1C4 597 aa22.86■■□□□ 1.25
SSH3-209ENST00000532600 A0A1W2PRG0 241 aa22.85■■□□□ 1.25
SSH3-209ENST00000532600 OTUD7AQ8TE49 926 aaPredicted RBP22.85■■□□□ 1.25
SSH3-209ENST00000532600 COA7Q96BR5 231 aa22.85■■□□□ 1.25
SSH3-209ENST00000532600 ATP8A2Q9NTI2 1148 aa22.85■■□□□ 1.25
SSH3-209ENST00000532600 INHAP05111 366 aa22.84■■□□□ 1.25
SSH3-209ENST00000532600 FEZ1Q99689 392 aa22.84■■□□□ 1.25
SSH3-209ENST00000532600 CABP5Q9NP86 173 aa22.84■■□□□ 1.25
SSH3-209ENST00000532600 BIN2Q9UBW5 565 aaPredicted RBP22.84■■□□□ 1.25
SSH3-209ENST00000532600 CNMDO75829 334 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 GJB1P08034 283 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 VCAM1P19320 739 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 GJA8P48165 433 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 C12orf60Q5U649 245 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 SIAH1Q8IUQ4 282 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 KBTBD3Q8NAB2 608 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 RNF208Q9H0X6 261 aa22.83■■□□□ 1.25
SSH3-209ENST00000532600 MYH8P13535 1937 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 USP17L12C9JPN9 530 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 USP17L21D6R901 530 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 AKR1B1P15121 316 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 UBXN2AP68543 259 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 KIAA1755Q5JYT7 1200 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 CATSPERGQ6ZRH7 1159 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 UBE2Q1Q7Z7E8 422 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 CLEC10AQ8IUN9 316 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 GPRC5AQ8NFJ5 357 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 PORCNQ9H237 461 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 SLC4A4Q9Y6R1 1079 aa22.82■■□□□ 1.24
SSH3-209ENST00000532600 USP14P54578 494 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 ERVK-9P63128 1117 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 ERVK-24P63145 666 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 CTR9Q6PD62 1173 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 PI4K2BQ8TCG2 481 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 OSBP2Q969R2 916 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 STRBPQ96SI9 672 aaKnown RBP22.81■■□□□ 1.24
SSH3-209ENST00000532600 TAOK2Q9UL54 1235 aa22.81■■□□□ 1.24
SSH3-209ENST00000532600 RLFQ13129 1914 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L15C9J2P7 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L13C9JLJ4 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L11C9JVI0 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L18D6R9N7 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L22D6RA61 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L17D6RBQ6 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L19D6RCP7 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L20D6RJB6 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 CDK8P49336 464 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 USP17L24Q0WX57 530 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 TRIM32Q13049 653 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 ZSCAN25Q6NSZ9 544 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 PAGR1Q9BTK6 254 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 SWAP70Q9UH65 585 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 SALL3Q9BXA9 1300 aa22.8■■□□□ 1.24
SSH3-209ENST00000532600 MPHOSPH10O00566 681 aaKnown RBP22.79■■□□□ 1.24
SSH3-209ENST00000532600 C16orf86Q6ZW13 317 aa22.79■■□□□ 1.24
SSH3-209ENST00000532600 U2AF1L4Q8WU68 220 aaKnown RBP22.79■■□□□ 1.24
SSH3-209ENST00000532600 RPAP3Q9H6T3 665 aaPredicted RBP22.79■■□□□ 1.24
SSH3-209ENST00000532600 PAK6Q9NQU5 681 aaPredicted RBP22.79■■□□□ 1.24
SSH3-209ENST00000532600 GSG1L2A8MUP6 293 aa22.78■■□□□ 1.24
SSH3-209ENST00000532600 RNF113AO15541 343 aaKnown RBP22.78■■□□□ 1.24
SSH3-209ENST00000532600 TMEM179Q6ZVK1 233 aa22.78■■□□□ 1.24
SSH3-209ENST00000532600 USP6NLQ92738 828 aa22.78■■□□□ 1.24
SSH3-209ENST00000532600 BTBD7Q9P203 1132 aa22.78■■□□□ 1.24
SSH3-209ENST00000532600 SPDYE16A6NNV3 312 aaPredicted RBP22.77■■□□□ 1.24
SSH3-209ENST00000532600 M0R2C6 588 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 SGPL1O95470 568 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 CENPBP07199 599 aaPredicted RBP22.77■■□□□ 1.24
SSH3-209ENST00000532600 LBX2Q6XYB7 198 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 NKX2-3Q8TAU0 364 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 GTF3C2Q8WUA4 911 aaPredicted RBP22.77■■□□□ 1.24
SSH3-209ENST00000532600 TRIB2Q92519 343 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 APPBP2Q92624 585 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 GPATCH3Q96I76 525 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 RABGAP1Q9Y3P9 1069 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 TTC41PQ6P2S7 1318 aa22.77■■□□□ 1.24
SSH3-209ENST00000532600 SLC34A2O95436 690 aa22.76■■□□□ 1.23
SSH3-209ENST00000532600 CYP2B6P20813 491 aa22.76■■□□□ 1.23
SSH3-209ENST00000532600 MORN1Q5T089 497 aa22.76■■□□□ 1.23
SSH3-209ENST00000532600 GPR142Q7Z601 462 aa22.76■■□□□ 1.23
SSH3-209ENST00000532600 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.76■■□□□ 1.23
SSH3-209ENST00000532600 EPB41L4AQ9HCS5 686 aaPredicted RBP22.76■■□□□ 1.23
SSH3-209ENST00000532600 GREB1LQ9C091 1923 aaPredicted RBP22.76■■□□□ 1.23
SSH3-209ENST00000532600 A0A0G2JMZ2 1700 aa22.76■■□□□ 1.23
SSH3-209ENST00000532600 HMGCRP04035 888 aa22.75■■□□□ 1.23
SSH3-209ENST00000532600 MAPK4P31152 587 aa22.75■■□□□ 1.23
SSH3-209ENST00000532600 DEFB118Q96PH6 123 aa22.75■■□□□ 1.23
SSH3-209ENST00000532600 CRISPLD2Q9H0B8 497 aa22.75■■□□□ 1.23
SSH3-209ENST00000532600 PARP14Q460N5 1801 aa22.74■■□□□ 1.23
SSH3-209ENST00000532600 SBK1Q52WX2 424 aa22.74■■□□□ 1.23
SSH3-209ENST00000532600 SEC62Q99442 399 aaKnown RBP22.74■■□□□ 1.23
SSH3-209ENST00000532600 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.74■■□□□ 1.23
SSH3-209ENST00000532600 TMX2Q9Y320 296 aa22.74■■□□□ 1.23
SSH3-209ENST00000532600 GPAA1O43292 621 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 MX1P20591 662 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 ICA1Q05084 483 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 CCL14Q16627 93 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 MAP3K21Q5TCX8 1036 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms