RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 HSF2BPO75031 334 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 LMBR1Q8WVP7 490 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 NELFBQ8WX92 580 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 GBP2P32456 591 aaPredicted RBP17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 KIAA0753Q2KHM9 967 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 TTC14Q96N46 770 aa17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHA3-202ENST00000532566 GTF2IP78347 998 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 CALCRLQ16602 461 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 FCHSD1Q86WN1 690 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 NUP58Q9BVL2 599 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 SMCO2A6NFE2 343 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 PPP6R2O75170 966 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 CARD6Q9BX69 1037 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 NAPGQ99747 312 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 TSGA10Q9BZW7 698 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 FOXP1Q9H334 677 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 PRPHP41219 470 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 PCDHA5Q9Y5H7 936 aa17.16■□□□□ 0.34
PCDHA3-202ENST00000532566 GCOM1H8Y6P7 765 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 SH2B2O14492 632 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 MYZAPP0CAP1 466 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 TUBB2AQ13885 445 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 TOB2Q14106 344 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 TUBB2BQ9BVA1 445 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 OGFRQ9NZT2 677 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 FMNL1O95466 1100 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 IFNAR1P17181 557 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
PCDHA3-202ENST00000532566 CETN3O15182 167 aa17.14■□□□□ 0.34
PCDHA3-202ENST00000532566 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.34
PCDHA3-202ENST00000532566 LRRC8AQ8IWT6 810 aa17.14■□□□□ 0.34
PCDHA3-202ENST00000532566 KLRF2D3W0D1 207 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 LIFRP42702 1097 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 CHMP4BP1P59074 171 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 PIH1D3Q9NQM4 214 aaKnown RBP17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 RFX7Q2KHR2 1363 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 PRKAB2O43741 272 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 RAPGEF1Q13905 1077 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 RASGRF1Q13972 1273 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 ANKRD62A6NC57 917 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 MCAMP43121 646 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 HLFQ16534 295 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 DNAI2Q9GZS0 605 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
PCDHA3-202ENST00000532566 PTGDRQ13258 359 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 RBM26Q5T8P6 1007 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 CTNNA2P26232 953 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 ELF2Q15723 593 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 INF2Q27J81 1249 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 FAM107BQ9H098 131 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 ALDH1B1P30837 517 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 TCP10Q12799 353 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 MPHOSPH6Q99547 160 aaKnown RBP17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 USP40Q9NVE5 1235 aa17.13■□□□□ 0.33
PCDHA3-202ENST00000532566 EPB41P11171 864 aaKnown RBP17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 ADKP55263 362 aaKnown RBP17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 NEURL4Q96JN8 1562 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 H0YIN7 160 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 CCDC84Q86UT8 332 aaPredicted RBP17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 CCDC51Q96ER9 411 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 VWA3BQ502W6 1294 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 FMNL3Q8IVF7 1028 aa17.12■□□□□ 0.33
PCDHA3-202ENST00000532566 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 U2AF2P26368 475 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 BTDP43251 543 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 VAV2P52735 878 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 PYCARDQ9ULZ3 195 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms