RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ADM5C9JUS6 153 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 SLC27A2O14975 620 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 CYP21A2P08686 494 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 ZKSCAN1P17029 563 aaPredicted RBP14.83□□□□□ -0.04
COPB1-208ENST00000532088 ANAPC15P60006 121 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 PDE4BQ07343 736 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 FSTL1Q12841 308 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 PTGDRQ13258 359 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 KRT32Q14532 448 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 MAP1SQ66K74 1059 aaPredicted RBP14.83□□□□□ -0.04
COPB1-208ENST00000532088 CREB3L3Q68CJ9 461 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 CDCA5Q96FF9 252 aa14.83□□□□□ -0.04
COPB1-208ENST00000532088 GLIS2Q9BZE0 524 aaPredicted RBP14.83□□□□□ -0.04
COPB1-208ENST00000532088 UNCXA6NJT0 531 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 ORC4O43929 436 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 ITGBL1O95965 494 aaPredicted RBP14.82□□□□□ -0.04
COPB1-208ENST00000532088 CYP2D6P10635 497 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 PTPREP23469 700 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 FKBP1BP68106 108 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 NBPF12Q5TAG4 269 aaPredicted RBP14.82□□□□□ -0.04
COPB1-208ENST00000532088 TATDN1Q6P1N9 297 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 TRIM34Q9BYJ4 488 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 CNNM2Q9H8M5 875 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 GINM1Q9NU53 330 aa14.82□□□□□ -0.04
COPB1-208ENST00000532088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
COPB1-208ENST00000532088 SSC5DA1L4H1 1573 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
COPB1-208ENST00000532088 RBM25P49756 843 aaKnown RBP14.81□□□□□ -0.04
COPB1-208ENST00000532088 MAP3K11Q16584 847 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 CDAN1Q8IWY9 1227 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
COPB1-208ENST00000532088 IL27Q8NEV9 243 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 CCDC17Q96LX7 622 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 ZNF341Q9BYN7 854 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 NBPF3Q9H094 633 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.81□□□□□ -0.04
COPB1-208ENST00000532088 ZNF112Q9UJU3 913 aa14.81□□□□□ -0.04
COPB1-208ENST00000532088 CYP2D7A0A087X1C5 515 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 CDK8P49336 464 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 HAND2P61296 217 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 TBC1D10CQ8IV04 446 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 KRT23Q9C075 422 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 SCAF8Q9UPN6 1271 aaKnown RBP14.8□□□□□ -0.04
COPB1-208ENST00000532088 PASKQ96RG2 1323 aa14.8□□□□□ -0.04
COPB1-208ENST00000532088 E7EWF7 191 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 ZMYND10O75800 440 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 SHMT1P34896 483 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 CTDSPL2Q05D32 466 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 TRDNQ13061 729 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 POTEEQ6S8J3 1075 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 PLIN4Q96Q06 1357 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 MTA3Q9BTC8 594 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 PAPPA2Q9BXP8 1791 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 C22orf23Q9BZE7 217 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 TM6SF1Q9BZW5 370 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 SNX14Q9Y5W7 946 aa14.79□□□□□ -0.04
COPB1-208ENST00000532088 PHF20L1A8MW92 1017 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 CTNND1O60716 968 aaKnown RBP14.78□□□□□ -0.04
COPB1-208ENST00000532088 HMGB1P09429 215 aaKnown RBP14.78□□□□□ -0.04
COPB1-208ENST00000532088 PSMA5P28066 241 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 PBX2P40425 430 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 HIC1Q14526 733 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 NOL9Q5SY16 702 aaKnown RBP14.78□□□□□ -0.04
COPB1-208ENST00000532088 ARMC9Q7Z3E5 817 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 ZNF444Q8N0Y2 327 aaPredicted RBP14.78□□□□□ -0.04
COPB1-208ENST00000532088 NCOA7Q8NI08 942 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 ESR2Q92731 530 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 DYNLL2Q96FJ2 89 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 TBC1D32Q96NH3 1257 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 PLSCR2Q9NRY7 297 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 TRPM7Q96QT4 1865 aa14.78□□□□□ -0.04
COPB1-208ENST00000532088 WDR19Q8NEZ3 1342 aa14.77□□□□□ -0.04
COPB1-208ENST00000532088 PPP1R3GB7ZBB8 358 aa14.77□□□□□ -0.05
COPB1-208ENST00000532088 RASA1P20936 1047 aa14.77□□□□□ -0.05
COPB1-208ENST00000532088 IREB2P48200 963 aaKnown RBP14.77□□□□□ -0.05
COPB1-208ENST00000532088 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
COPB1-208ENST00000532088 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.05
COPB1-208ENST00000532088 PRAMEF18Q5VWM3 479 aa14.77□□□□□ -0.05
COPB1-208ENST00000532088 STOX1Q6ZVD7 989 aa14.77□□□□□ -0.05
COPB1-208ENST00000532088 MIGA2Q7L4E1 593 aa14.77□□□□□ -0.05
COPB1-208ENST00000532088 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.77□□□□□ -0.05
COPB1-208ENST00000532088 NEDD4P46934 1319 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 SMIM22K7EJ46 135 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 TRAF5O00463 557 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 ARHGAP33O14559 1287 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 USP2O75604 605 aaPredicted RBP14.76□□□□□ -0.05
COPB1-208ENST00000532088 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
COPB1-208ENST00000532088 COL9A1P20849 921 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 CAP2P40123 477 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 TMEM179Q6ZVK1 233 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 RALYLQ86SE5 291 aaKnown RBP14.76□□□□□ -0.05
COPB1-208ENST00000532088 SLC44A5Q8NCS7 719 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 NEDD1Q8NHV4 660 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms