RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
LINC02548-201ENST00000531749 SOCS4Q8WXH5 440 aa11.67□□□□□ -0.54
LINC02548-201ENST00000531749 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
LINC02548-201ENST00000531749 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
LINC02548-201ENST00000531749 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
LINC02548-201ENST00000531749 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
LINC02548-201ENST00000531749 RABGAP1Q9Y3P9 1069 aa11.67□□□□□ -0.54
LINC02548-201ENST00000531749 ZNFX1Q9P2E3 1918 aaKnown RBP11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L15C9J2P7 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L13C9JLJ4 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L11C9JVI0 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L18D6R9N7 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L22D6RA61 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L17D6RBQ6 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L19D6RCP7 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L20D6RJB6 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 PLCG2P16885 1265 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 PTPREP23469 700 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 PLCD1P51178 756 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 USP17L24Q0WX57 530 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
LINC02548-201ENST00000531749 FRAT1Q92837 279 aaPredicted RBP11.66□□□□□ -0.54
LINC02548-201ENST00000531749 APBA2Q99767 749 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 SENP6Q9GZR1 1112 aaPredicted RBP11.66□□□□□ -0.54
LINC02548-201ENST00000531749 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 MAST2Q6P0Q8 1798 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 DNAH12Q6ZR08 3092 aa11.66□□□□□ -0.54
LINC02548-201ENST00000531749 A0A1W2PRG0 241 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 SLC15A5A6NIM6 579 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
LINC02548-201ENST00000531749 SURF6O75683 361 aaKnown RBP11.65□□□□□ -0.54
LINC02548-201ENST00000531749 HOXC6P09630 235 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 CYP2C19P33261 490 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 SHMT1P34896 483 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
LINC02548-201ENST00000531749 PDE3AQ14432 1141 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 CCDC158Q5M9N0 1113 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 FAM161BQ96MY7 647 aa11.65□□□□□ -0.54
LINC02548-201ENST00000531749 NOL10Q9BSC4 688 aaKnown RBP11.65□□□□□ -0.54
LINC02548-201ENST00000531749 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
LINC02548-201ENST00000531749 SMIM22K7EJ46 135 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 COBLO75128 1261 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 VCAM1P19320 739 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 GRB14Q14449 540 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 LBX2Q6XYB7 198 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 SIAH1Q8IUQ4 282 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
LINC02548-201ENST00000531749 DDX20Q9UHI6 824 aaKnown RBP11.64□□□□□ -0.55
LINC02548-201ENST00000531749 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 HLA-DOAP06340 250 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 RLBP1P12271 317 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 CYBAP13498 195 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 GABPAQ06546 454 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 SEPT2Q15019 361 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 SHHQ15465 462 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 CERKLQ49MI3 558 aaPredicted RBP11.63□□□□□ -0.55
LINC02548-201ENST00000531749 PRAMEF19Q5SWL8 479 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 C9orf50Q5SZB4 431 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
LINC02548-201ENST00000531749 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 FAM109BQ6ICB4 259 aaPredicted RBP11.63□□□□□ -0.55
LINC02548-201ENST00000531749 MAGEB6Q8N7X4 407 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
LINC02548-201ENST00000531749 LPAR1Q92633 364 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
LINC02548-201ENST00000531749 EHD4Q9H223 541 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 SERPINB13Q9UIV8 391 aa11.63□□□□□ -0.55
LINC02548-201ENST00000531749 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
LINC02548-201ENST00000531749 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
LINC02548-201ENST00000531749 CNGA1P29973 690 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 RTP1P59025 263 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 ABCB5Q2M3G0 1257 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 WDR78Q5VTH9 848 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 MFSD14CQ5VZR4 134 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 SLC39A5Q6ZMH5 540 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 SH3RF1Q7Z6J0 888 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 CCAR1Q8IX12 1150 aaKnown RBP11.62□□□□□ -0.55
LINC02548-201ENST00000531749 MOV10L1Q9BXT6 1211 aaKnown RBP11.62□□□□□ -0.55
LINC02548-201ENST00000531749 TRIM34Q9BYJ4 488 aa11.62□□□□□ -0.55
LINC02548-201ENST00000531749 RPAP3Q9H6T3 665 aaPredicted RBP11.62□□□□□ -0.55
LINC02548-201ENST00000531749 LAMA2P24043 3122 aaKnown RBP11.62□□□□□ -0.55
LINC02548-201ENST00000531749 UNC80Q8N2C7 3258 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 CYP2D6P10635 497 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 ITGB8P26012 769 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 USP5P45974 858 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
LINC02548-201ENST00000531749 FEZ1Q99689 392 aa11.61□□□□□ -0.55
LINC02548-201ENST00000531749 IGSF3O75054 1194 aa11.6□□□□□ -0.55
LINC02548-201ENST00000531749 ADORA2AP29274 412 aa11.6□□□□□ -0.55
LINC02548-201ENST00000531749 USP14P54578 494 aa11.6□□□□□ -0.55
LINC02548-201ENST00000531749 CCNA1P78396 465 aa11.6□□□□□ -0.55
LINC02548-201ENST00000531749 OS9Q13438 667 aaPredicted RBP11.6□□□□□ -0.55
LINC02548-201ENST00000531749 COG2Q14746 738 aa11.6□□□□□ -0.55
LINC02548-201ENST00000531749 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
LINC02548-201ENST00000531749 TTC6Q86TZ1 520 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms