RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 A0A1W2PRG0 241 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 ATP5JP18859 108 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 ADD2P35612 726 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 UBXN2AP68543 259 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
SDHD-212ENST00000531744 ZYXQ15942 572 aaKnown RBP15.21■□□□□ 0.03
SDHD-212ENST00000531744 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.03
SDHD-212ENST00000531744 SIAH1Q8IUQ4 282 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 COA7Q96BR5 231 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 DEFB118Q96PH6 123 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 ARMT1Q9H993 441 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 TMOD4Q9NZQ9 345 aa15.21■□□□□ 0.03
SDHD-212ENST00000531744 ZNF236Q9UL36 1845 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 HMMRO75330 724 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 IFIT2P09913 472 aaKnown RBP15.2■□□□□ 0.02
SDHD-212ENST00000531744 ERVK-9P63128 1117 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 ERVK-24P63145 666 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 IRX3P78415 501 aaPredicted RBP15.2■□□□□ 0.02
SDHD-212ENST00000531744 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 SEPT2Q15019 361 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
SDHD-212ENST00000531744 CERKLQ49MI3 558 aaPredicted RBP15.2■□□□□ 0.02
SDHD-212ENST00000531744 USP17L2Q6R6M4 530 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 DIS3LQ8TF46 1054 aaKnown RBP15.2■□□□□ 0.02
SDHD-212ENST00000531744 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 HAUS7Q99871 368 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 COL6A3P12111 3177 aa15.2■□□□□ 0.02
SDHD-212ENST00000531744 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 VCAM1P19320 739 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 FXR1P51114 621 aaKnown RBP eCLIP15.19■□□□□ 0.02
SDHD-212ENST00000531744 RAB3GAP1Q15042 981 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 CATSPERGQ6ZRH7 1159 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 TTC6Q86TZ1 520 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 CERS3Q8IU89 383 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 CLEC10AQ8IUN9 316 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 KIAA1683Q9H0B3 1180 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
SDHD-212ENST00000531744 PRO3102Q9H379 93 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
SDHD-212ENST00000531744 FARP2O94887 1054 aaPredicted RBP15.18■□□□□ 0.02
SDHD-212ENST00000531744 MBD4O95243 580 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 CYP2B6P20813 491 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 CCL14Q16627 93 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 MORN1Q5T089 497 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 GPRC5AQ8NFJ5 357 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 CRNKL1Q9BZJ0 848 aaKnown RBP15.18■□□□□ 0.02
SDHD-212ENST00000531744 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
SDHD-212ENST00000531744 HMGCRP04035 888 aa15.17■□□□□ 0.02
SDHD-212ENST00000531744 POLR3DP05423 398 aaPredicted RBP15.17■□□□□ 0.02
SDHD-212ENST00000531744 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
SDHD-212ENST00000531744 GPR142Q7Z601 462 aa15.17■□□□□ 0.02
SDHD-212ENST00000531744 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
SDHD-212ENST00000531744 PAGR1Q9BTK6 254 aa15.17■□□□□ 0.02
SDHD-212ENST00000531744 PUS7LQ9H0K6 701 aaKnown RBP15.17■□□□□ 0.02
SDHD-212ENST00000531744 MCM3APO60318 1980 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 IGHA2P01877 340 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 AKR1B1P15121 316 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 LRRCC1Q9C099 1032 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 FLRT1Q9NZU1 646 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 PCDH10Q9P2E7 1040 aa15.16■□□□□ 0.02
SDHD-212ENST00000531744 C12orf60Q5U649 245 aa15.15■□□□□ 0.02
SDHD-212ENST00000531744 DPF3Q92784 378 aa15.15■□□□□ 0.02
SDHD-212ENST00000531744 PAWRQ96IZ0 340 aaKnown RBP15.15■□□□□ 0.02
SDHD-212ENST00000531744 RPAP3Q9H6T3 665 aaPredicted RBP15.15■□□□□ 0.02
SDHD-212ENST00000531744 PCDHB15Q9Y5E8 787 aa15.15■□□□□ 0.02
SDHD-212ENST00000531744 RPTORQ8N122 1335 aa15.15■□□□□ 0.02
SDHD-212ENST00000531744 TFRCP02786 760 aaKnown RBP15.14■□□□□ 0.01
SDHD-212ENST00000531744 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
SDHD-212ENST00000531744 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
SDHD-212ENST00000531744 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
SDHD-212ENST00000531744 CACNB2Q08289 660 aaPredicted RBP15.14■□□□□ 0.01
SDHD-212ENST00000531744 UBE3CQ15386 1083 aa15.14■□□□□ 0.01
SDHD-212ENST00000531744 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
SDHD-212ENST00000531744 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
SDHD-212ENST00000531744 FEZ1Q99689 392 aa15.14■□□□□ 0.01
SDHD-212ENST00000531744 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
SDHD-212ENST00000531744 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
SDHD-212ENST00000531744 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
SDHD-212ENST00000531744 RABGAP1Q9Y3P9 1069 aa15.14■□□□□ 0.01
SDHD-212ENST00000531744 USP17L12C9JPN9 530 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms