RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 MSCO60682 206 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 CYBAP13498 195 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 SMAD3P84022 425 aaKnown RBP13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 GJC2Q5T442 439 aaPredicted RBP13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 SLC39A5Q6ZMH5 540 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 BADQ92934 168 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 GH2P01242 217 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 SH3RF1Q7Z6J0 888 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
TM9SF1-210ENST00000530563 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 BAG3O95817 575 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 CYP2E1P05181 493 aaPredicted RBP13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 PLCG2P16885 1265 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 ITGB8P26012 769 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 CNGA1P29973 690 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 CCNA1P78396 465 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 PDLIM7Q9NR12 457 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 PRKAG2Q9UGJ0 569 aa13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 SAP30BPQ9UHR5 308 aaKnown RBP13.12□□□□□ -0.31
TM9SF1-210ENST00000530563 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 ANP32CO43423 234 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 VCAM1P19320 739 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 EPHB4P54760 987 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 DYNLL1P63167 89 aaKnown RBP13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 ZYXQ15942 572 aaKnown RBP13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 C1orf53Q5VUE5 145 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
TM9SF1-210ENST00000530563 TRANK1O15050 2925 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 PNMA6EA0A0J9YXQ4 647 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 COBLO75128 1261 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 GUCY1A2P33402 732 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 OLFML2BQ68BL8 750 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 USP38Q8NB14 1042 aa13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 NOL10Q9BSC4 688 aaKnown RBP13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 PIH1D3Q9NQM4 214 aaKnown RBP13.1□□□□□ -0.31
TM9SF1-210ENST00000530563 SEPT4O43236 478 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 GNAI3P08754 354 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 FOSL2P15408 326 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 ADCYAP1R1P41586 468 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 TLE2Q04725 743 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 LRRC41Q15345 812 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 NCOR1O75376 2440 aa13.09□□□□□ -0.31
TM9SF1-210ENST00000530563 TMEM265A0A087WTH1 108 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 STRNO43815 780 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 IGSF3O75054 1194 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 ADORA2AP29274 412 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 SHMT1P34896 483 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 USP14P54578 494 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 PRAMEF19Q5SWL8 479 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 ZNF512BQ96KM6 892 aaPredicted RBP13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 EHD4Q9H223 541 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 GPR108Q9NPR9 543 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 PRDM5Q9NQX1 630 aaPredicted RBP13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
TM9SF1-210ENST00000530563 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 CT47B1P0C2W7 299 aaPredicted RBP13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 COL9A1P20849 921 aa13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 ZAP70P43403 619 aa13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
TM9SF1-210ENST00000530563 DPP9Q86TI2 863 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms