RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 GPR153Q6NV75 609 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 MAGEB6Q8N7X4 407 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 PFASO15067 1338 aa18.2■□□□□ 0.5
CAPN1-219ENST00000530495 SYN1P17600 705 aa18.19■□□□□ 0.5
CAPN1-219ENST00000530495 CCND3P30281 292 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-219ENST00000530495 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
CAPN1-219ENST00000530495 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
CAPN1-219ENST00000530495 APBA2Q99767 749 aa18.19■□□□□ 0.5
CAPN1-219ENST00000530495 KIAA1683Q9H0B3 1180 aa18.19■□□□□ 0.5
CAPN1-219ENST00000530495 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
CAPN1-219ENST00000530495 CNMDO75829 334 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 RLBP1P12271 317 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-219ENST00000530495 USP14P54578 494 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 CCNA1P78396 465 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 MAP3K12Q12852 859 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 ZYXQ15942 572 aaKnown RBP18.18■□□□□ 0.5
CAPN1-219ENST00000530495 CERKLQ49MI3 558 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-219ENST00000530495 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
CAPN1-219ENST00000530495 FEZ1Q99689 392 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 NDUFB9Q9Y6M9 179 aa18.18■□□□□ 0.5
CAPN1-219ENST00000530495 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
CAPN1-219ENST00000530495 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
CAPN1-219ENST00000530495 ABCB5Q2M3G0 1257 aa18.17■□□□□ 0.5
CAPN1-219ENST00000530495 LRIT3Q3SXY7 679 aa18.17■□□□□ 0.5
CAPN1-219ENST00000530495 LBX2Q6XYB7 198 aa18.17■□□□□ 0.5
CAPN1-219ENST00000530495 SLC17A8Q8NDX2 589 aa18.17■□□□□ 0.5
CAPN1-219ENST00000530495 SLC15A5A6NIM6 579 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 VCAM1P19320 739 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 PTPREP23469 700 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 PLCD1P51178 756 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 ACER1Q8TDN7 264 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 RIOK1Q9BRS2 568 aaKnown RBP18.16■□□□□ 0.5
CAPN1-219ENST00000530495 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
CAPN1-219ENST00000530495 SHMT1P34896 483 aa18.15■□□□□ 0.5
CAPN1-219ENST00000530495 AACSQ86V21 672 aa18.15■□□□□ 0.5
CAPN1-219ENST00000530495 TDHQ8IZJ6 230 aa18.15■□□□□ 0.5
CAPN1-219ENST00000530495 CWC22Q9HCG8 908 aaKnown RBP18.15■□□□□ 0.5
CAPN1-219ENST00000530495 FLRT1Q9NZU1 646 aa18.15■□□□□ 0.5
CAPN1-219ENST00000530495 BTBD7Q9P203 1132 aa18.15■□□□□ 0.5
CAPN1-219ENST00000530495 HOXC6P09630 235 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 GUCY1A2P33402 732 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 GABPAQ06546 454 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 LRRC26Q2I0M4 334 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 MFSD14CQ5VZR4 134 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 UBE2OQ9C0C9 1292 aaKnown RBP18.14■□□□□ 0.49
CAPN1-219ENST00000530495 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 FRMPD3Q5JV73 1810 aa18.14■□□□□ 0.49
CAPN1-219ENST00000530495 MAGEB6P1A0A0J9YX57 407 aa18.13■□□□□ 0.49
CAPN1-219ENST00000530495 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-219ENST00000530495 RPAP3Q9H6T3 665 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-219ENST00000530495 IVNS1ABPQ9Y6Y0 642 aa18.13■□□□□ 0.49
CAPN1-219ENST00000530495 LAMA3Q16787 3333 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-219ENST00000530495 IGHA2P01877 340 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 POLR3DP05423 398 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-219ENST00000530495 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 GRB14Q14449 540 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 SEPT2Q15019 361 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 HSP90AB4PQ58FF6 505 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 SLC9C2Q5TAH2 1124 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 DEFB123Q8N688 67 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 HOXC10Q9NYD6 342 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 COL6A3P12111 3177 aa18.12■□□□□ 0.49
CAPN1-219ENST00000530495 DLL1O00548 723 aa18.11■□□□□ 0.49
CAPN1-219ENST00000530495 MSCO60682 206 aa18.11■□□□□ 0.49
CAPN1-219ENST00000530495 COG2Q14746 738 aa18.11■□□□□ 0.49
CAPN1-219ENST00000530495 NPLOC4Q8TAT6 608 aa18.11■□□□□ 0.49
CAPN1-219ENST00000530495 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
CAPN1-219ENST00000530495 CRNKL1Q9BZJ0 848 aaKnown RBP18.11■□□□□ 0.49
CAPN1-219ENST00000530495 DDX20Q9UHI6 824 aaKnown RBP18.11■□□□□ 0.49
CAPN1-219ENST00000530495 A0A1W2PRG0 241 aa18.1■□□□□ 0.49
CAPN1-219ENST00000530495 STRNO43815 780 aa18.1■□□□□ 0.49
CAPN1-219ENST00000530495 PDE6AP16499 860 aa18.1■□□□□ 0.49
CAPN1-219ENST00000530495 LPAR1Q92633 364 aa18.1■□□□□ 0.49
CAPN1-219ENST00000530495 SENP6Q9GZR1 1112 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-219ENST00000530495 IL1RAPL2Q9NP60 686 aa18.1■□□□□ 0.49
CAPN1-219ENST00000530495 MCM9Q9NXL9 1143 aa18.1■□□□□ 0.49
CAPN1-219ENST00000530495 NAV1Q8NEY1 1877 aa18.09■□□□□ 0.49
CAPN1-219ENST00000530495 CNGA1P29973 690 aa18.09■□□□□ 0.49
CAPN1-219ENST00000530495 CYP2C19P33261 490 aa18.09■□□□□ 0.49
CAPN1-219ENST00000530495 HNRNPUQ00839 825 aaKnown RBP eCLIP18.09■□□□□ 0.49
CAPN1-219ENST00000530495 Q7L0L9 218 aa18.09■□□□□ 0.49
CAPN1-219ENST00000530495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.09■□□□□ 0.49
CAPN1-219ENST00000530495 MTMR10Q9NXD2 777 aa18.09■□□□□ 0.49
CAPN1-219ENST00000530495 RLFQ13129 1914 aa18.09■□□□□ 0.49
CAPN1-219ENST00000530495 ZNF532Q9HCE3 1301 aa18.08■□□□□ 0.49
CAPN1-219ENST00000530495 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.48
CAPN1-219ENST00000530495 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-219ENST00000530495 EVX2Q03828 476 aa18.08■□□□□ 0.48
CAPN1-219ENST00000530495 DPP9Q86TI2 863 aa18.08■□□□□ 0.48
CAPN1-219ENST00000530495 CLASRPQ8N2M8 674 aaKnown RBP18.08■□□□□ 0.48
CAPN1-219ENST00000530495 SHCBP1Q8NEM2 672 aa18.08■□□□□ 0.48
CAPN1-219ENST00000530495 TRPV1Q8NER1 839 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms