RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 MCM3APO60318 1980 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
NUP98-217ENST00000530345 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
NUP98-217ENST00000530345 TRIM32Q13049 653 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 LHX8Q68G74 356 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 KIAA1683Q9H0B3 1180 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 DNAJC18Q9H819 358 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 TXNRD2Q9NNW7 524 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 AATFQ9NY61 560 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP98-217ENST00000530345 RBPJLQ9UBG7 517 aa9.12□□□□□ -0.95
NUP98-217ENST00000530345 MUC3AQ02505 3323 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 SPTBN5Q9NRC6 3674 aaKnown RBP9.11□□□□□ -0.95
NUP98-217ENST00000530345 MYH4Q9Y623 1939 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 TMEM265A0A087WTH1 108 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 STRNO43815 780 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 GRB14Q14449 540 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 RRP1BQ14684 758 aaKnown RBP9.11□□□□□ -0.95
NUP98-217ENST00000530345 LRRC26Q2I0M4 334 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 TTC39AQ5SRH9 613 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 ZNF697Q5TEC3 545 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 OLFML2BQ68BL8 750 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 TATDN1Q6P1N9 297 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 PI16Q6UXB8 463 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 TBC1D9Q6ZT07 1266 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 Q7L0L9 218 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP98-217ENST00000530345 ARRDC4Q8NCT1 418 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 TGFBRAP1Q8WUH2 860 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 EDC3Q96F86 508 aaKnown RBP9.11□□□□□ -0.95
NUP98-217ENST00000530345 PAGR1Q9BTK6 254 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 PORCNQ9H237 461 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 SLC5A4Q9NY91 659 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 DDX20Q9UHI6 824 aaKnown RBP9.11□□□□□ -0.95
NUP98-217ENST00000530345 SERPINB13Q9UIV8 391 aa9.11□□□□□ -0.95
NUP98-217ENST00000530345 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 PTPREP23469 700 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 CCND3P30281 292 aaPredicted RBP9.1□□□□□ -0.95
NUP98-217ENST00000530345 RARSP54136 660 aaKnown RBP9.1□□□□□ -0.95
NUP98-217ENST00000530345 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 TNNI3KQ59H18 835 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 MAPKAPK5Q8IW41 473 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 MB21D1Q8N884 522 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 SHCBP1Q8NEM2 672 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 EMILIN3Q9NT22 766 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 PALD1Q9ULE6 856 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 FPGT-TNNI3KV9GXZ4 949 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 ROBO3Q96MS0 1386 aa9.1□□□□□ -0.95
NUP98-217ENST00000530345 TRANK1O15050 2925 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 KBTBD13C9JR72 458 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 GDF11O95390 407 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 GH2P01242 217 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 VCAM1P19320 739 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
NUP98-217ENST00000530345 C1orf53Q5VUE5 145 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 CATSPERGQ6ZRH7 1159 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 ABRAQ8N0Z2 381 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 SENP6Q9GZR1 1112 aaPredicted RBP9.09□□□□□ -0.95
NUP98-217ENST00000530345 CABP5Q9NP86 173 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 NRBP1Q9UHY1 535 aa9.09□□□□□ -0.95
NUP98-217ENST00000530345 GBF1Q92538 1859 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 GREB1LQ9C091 1923 aaPredicted RBP9.08□□□□□ -0.96
NUP98-217ENST00000530345 IGHA2P01877 340 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 CYBAP13498 195 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 USP5P45974 858 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 SMAD3P84022 425 aaKnown RBP9.08□□□□□ -0.96
NUP98-217ENST00000530345 MAP3K12Q12852 859 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 OS9Q13438 667 aaPredicted RBP9.08□□□□□ -0.96
NUP98-217ENST00000530345 POLA2Q14181 598 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 SNX17Q15036 470 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 CCL14Q16627 93 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 ABCB5Q2M3G0 1257 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 Q3C1V9 767 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 CERKLQ49MI3 558 aaPredicted RBP9.08□□□□□ -0.96
NUP98-217ENST00000530345 SSH3Q8TE77 659 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 GUCD1Q96NT3 240 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 COL25A1Q9BXS0 654 aaPredicted RBP9.08□□□□□ -0.96
NUP98-217ENST00000530345 SH2D4AQ9H788 454 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 HOXC10Q9NYD6 342 aa9.08□□□□□ -0.96
NUP98-217ENST00000530345 PNMA6EA0A0J9YXQ4 647 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
NUP98-217ENST00000530345 SEPT4O43236 478 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 CNMDO75829 334 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
NUP98-217ENST00000530345 TRIM27P14373 513 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 CYP7A1P22680 504 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 CNGA1P29973 690 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 COPB2P35606 906 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 RTP1P59025 263 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 WDR78Q5VTH9 848 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 ADGRA1Q86SQ6 560 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 DPP9Q86TI2 863 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
NUP98-217ENST00000530345 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 MROH8Q9H579 483 aa9.07□□□□□ -0.96
NUP98-217ENST00000530345 NOP58Q9Y2X3 529 aaKnown RBP9.07□□□□□ -0.96
NUP98-217ENST00000530345 CHD9Q3L8U1 2897 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 JAG1P78504 1218 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 COG2Q14746 738 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms