RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SHHQ15465 462 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 MYLIPQ8WY64 445 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 PRUNE2Q8WUY3 3088 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 PLXNB2O15031 1838 aa12.8□□□□□ -0.36
COPB1-207ENST00000529866 GH2P01242 217 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 CYP2C19P33261 490 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 MCAMP43121 646 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 PPP4CP60510 307 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 JAG1P78504 1218 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
COPB1-207ENST00000529866 C9orf50Q5SZB4 431 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 SLC39A5Q6ZMH5 540 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 BADQ92934 168 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 MEIS3Q99687 375 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 MUC3AQ02505 3323 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 DNAH12Q6ZR08 3092 aa12.79□□□□□ -0.36
COPB1-207ENST00000529866 IGSF3O75054 1194 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 CNMDO75829 334 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 GNAI3P08754 354 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 CYBAP13498 195 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 MTX1Q13505 466 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 SHROOM1Q2M3G4 852 aaPredicted RBP12.78□□□□□ -0.36
COPB1-207ENST00000529866 TRIM60Q495X7 471 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 TJAP1Q5JTD0 557 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 GJC2Q5T442 439 aaPredicted RBP12.78□□□□□ -0.36
COPB1-207ENST00000529866 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
COPB1-207ENST00000529866 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
COPB1-207ENST00000529866 MAST2Q6P0Q8 1798 aa12.77□□□□□ -0.36
COPB1-207ENST00000529866 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
COPB1-207ENST00000529866 VCAM1P19320 739 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 SNX17Q15036 470 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 OLFML2BQ68BL8 750 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 NPLOC4Q8TAT6 608 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 RNPC3Q96LT9 517 aaKnown RBP12.77□□□□□ -0.37
COPB1-207ENST00000529866 KIAA1683Q9H0B3 1180 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
COPB1-207ENST00000529866 SAP30BPQ9UHR5 308 aaKnown RBP12.77□□□□□ -0.37
COPB1-207ENST00000529866 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
COPB1-207ENST00000529866 SEPT4O43236 478 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 CT47B1P0C2W7 299 aaPredicted RBP12.76□□□□□ -0.37
COPB1-207ENST00000529866 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPB1-207ENST00000529866 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 CERS3Q8IU89 383 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 CABP5Q9NP86 173 aa12.76□□□□□ -0.37
COPB1-207ENST00000529866 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
COPB1-207ENST00000529866 TNFRSF10AO00220 468 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 STRNO43815 780 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 COL9A1P20849 921 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 ADORA2AP29274 412 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 CCDC158Q5M9N0 1113 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
COPB1-207ENST00000529866 ATAD5Q96QE3 1844 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
COPB1-207ENST00000529866 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 SERPINB13Q9UIV8 391 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 TACC3Q9Y6A5 838 aa12.75□□□□□ -0.37
COPB1-207ENST00000529866 TRIM43BA6NCK2 446 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 USP5P45974 858 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 ABCB5Q2M3G0 1257 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 CERKLQ49MI3 558 aaPredicted RBP12.74□□□□□ -0.37
COPB1-207ENST00000529866 ANO1Q5XXA6 986 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 TRIM43Q96BQ3 446 aaPredicted RBP12.74□□□□□ -0.37
COPB1-207ENST00000529866 EHD4Q9H223 541 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
COPB1-207ENST00000529866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
COPB1-207ENST00000529866 IGHA2P01877 340 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 CLTBP09497 229 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 TLE2Q04725 743 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 LRRC41Q15345 812 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 SH3RF1Q7Z6J0 888 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 TTC6Q86TZ1 520 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 MB21D1Q8N884 522 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 SHCBP1Q8NEM2 672 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
COPB1-207ENST00000529866 SPATC1LQ9H0A9 340 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
COPB1-207ENST00000529866 NCOR1O75376 2440 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 GNAI2P04899 355 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 RARBP10826 455 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 RAG1P15918 1043 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 ERCC3P19447 782 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 CYP7A1P22680 504 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 DNAJB2P25686 324 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 COG2Q14746 738 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms