RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 ADD2P35612 726 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.17
SRPRA-203ENST00000528744 SEPT2Q15019 361 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 ABCB5Q2M3G0 1257 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 TTC6Q86TZ1 520 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 DIS3LQ8TF46 1054 aaKnown RBP14.02□□□□□ -0.17
SRPRA-203ENST00000528744 TRIB2Q92519 343 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 DPF3Q92784 378 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 C12orf42Q96LP6 360 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
SRPRA-203ENST00000528744 TFRCP02786 760 aaKnown RBP14.01□□□□□ -0.17
SRPRA-203ENST00000528744 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
SRPRA-203ENST00000528744 FXR1P51114 621 aaKnown RBP eCLIP14.01□□□□□ -0.17
SRPRA-203ENST00000528744 ERVK-9P63128 1117 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 ERVK-24P63145 666 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 TTF1Q15361 905 aaPredicted RBP14.01□□□□□ -0.17
SRPRA-203ENST00000528744 CCL14Q16627 93 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 CATSPERGQ6ZRH7 1159 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 HAUS7Q99871 368 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 PAGR1Q9BTK6 254 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 MCM9Q9NXL9 1143 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 BTBD7Q9P203 1132 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 PCDH10Q9P2E7 1040 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 SZT2Q5T011 3432 aa14.01□□□□□ -0.17
SRPRA-203ENST00000528744 CEP290O15078 2479 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 HMMRO75330 724 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 FARP2O94887 1054 aaPredicted RBP14□□□□□ -0.17
SRPRA-203ENST00000528744 PDE3AQ14432 1141 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 MORN1Q5T089 497 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 PAWRQ96IZ0 340 aaKnown RBP14□□□□□ -0.17
SRPRA-203ENST00000528744 KIAA1683Q9H0B3 1180 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 XRN2Q9H0D6 950 aaKnown RBP eCLIP14□□□□□ -0.17
SRPRA-203ENST00000528744 PAG1Q9NWQ8 432 aa14□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 MBD4O95243 580 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 VCAM1P19320 739 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 MAP3K21Q5TCX8 1036 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 TSHZ3Q63HK5 1081 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 GPR142Q7Z601 462 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 CERS3Q8IU89 383 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 GCC1Q96CN9 775 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
SRPRA-203ENST00000528744 PUS7LQ9H0K6 701 aaKnown RBP13.99□□□□□ -0.17
SRPRA-203ENST00000528744 PRO3102Q9H379 93 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 CDK5RAP2Q96SN8 1893 aa13.99□□□□□ -0.17
SRPRA-203ENST00000528744 MGAMO43451 1857 aa13.98□□□□□ -0.17
SRPRA-203ENST00000528744 HMGCRP04035 888 aa13.98□□□□□ -0.17
SRPRA-203ENST00000528744 AKR1B1P15121 316 aa13.98□□□□□ -0.17
SRPRA-203ENST00000528744 TMED8Q6PL24 325 aaPredicted RBP13.98□□□□□ -0.17
SRPRA-203ENST00000528744 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
SRPRA-203ENST00000528744 FLRT1Q9NZU1 646 aa13.98□□□□□ -0.17
SRPRA-203ENST00000528744 RBM27Q9P2N5 1060 aaKnown RBP13.98□□□□□ -0.17
SRPRA-203ENST00000528744 LOC285556D6RIA3 1793 aa13.98□□□□□ -0.17
SRPRA-203ENST00000528744 RPTORQ8N122 1335 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 MAST2Q6P0Q8 1798 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 SPDYE16A6NNV3 312 aaPredicted RBP13.97□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 USP17L21D6R901 530 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 ABCB7O75027 752 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 CACNB2Q08289 660 aaPredicted RBP13.97□□□□□ -0.17
SRPRA-203ENST00000528744 C12orf60Q5U649 245 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 PLEKHH3Q7Z736 793 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 FEZ1Q99689 392 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 NUDT12Q9BQG2 462 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
SRPRA-203ENST00000528744 DCTPP1Q9H773 170 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 PCDHB15Q9Y5E8 787 aa13.97□□□□□ -0.17
SRPRA-203ENST00000528744 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.17
SRPRA-203ENST00000528744 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.17
SRPRA-203ENST00000528744 CCND3P30281 292 aaPredicted RBP13.96□□□□□ -0.17
SRPRA-203ENST00000528744 CDK8P49336 464 aa13.96□□□□□ -0.17
SRPRA-203ENST00000528744 UBE3CQ15386 1083 aa13.96□□□□□ -0.17
SRPRA-203ENST00000528744 LHX8Q68G74 356 aa13.96□□□□□ -0.17
SRPRA-203ENST00000528744 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.17
SRPRA-203ENST00000528744 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRPRA-203ENST00000528744 LRRCC1Q9C099 1032 aa13.96□□□□□ -0.17
SRPRA-203ENST00000528744 HMX1Q9NP08 348 aaPredicted RBP13.96□□□□□ -0.17
SRPRA-203ENST00000528744 ATAD5Q96QE3 1844 aa13.96□□□□□ -0.17
SRPRA-203ENST00000528744 TRIOBPQ9H2D6 2365 aa13.96□□□□□ -0.18
SRPRA-203ENST00000528744 FOCADQ5VW36 1801 aa13.95□□□□□ -0.18
SRPRA-203ENST00000528744 IGHA2P01877 340 aa13.95□□□□□ -0.18
SRPRA-203ENST00000528744 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
SRPRA-203ENST00000528744 PTPREP23469 700 aa13.95□□□□□ -0.18
SRPRA-203ENST00000528744 MAPK4P31152 587 aa13.95□□□□□ -0.18
SRPRA-203ENST00000528744 USP14P54578 494 aa13.95□□□□□ -0.18
SRPRA-203ENST00000528744 CTR9Q6PD62 1173 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms