RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 SEPT2Q15019 361 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 CCAR1Q8IX12 1150 aaKnown RBP16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 SLC44A5Q8NCS7 719 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 ACER1Q8TDN7 264 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 PAGR1Q9BTK6 254 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 RNF208Q9H0X6 261 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 CEP290O15078 2479 aa16.71■□□□□ 0.27
CHRDL2-205ENST00000528471 USP17L15C9J2P7 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L13C9JLJ4 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L11C9JVI0 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L18D6R9N7 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L22D6RA61 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L17D6RBQ6 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L19D6RCP7 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L20D6RJB6 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 ERC2O15083 957 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 INHAP05111 366 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 VCAM1P19320 739 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L24Q0WX57 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 PXYLP1Q8TE99 480 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 TTC41PQ6P2S7 1318 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 USP17L21D6R901 530 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 GUCY1A2P33402 732 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 LRRFIP1Q32MZ4 808 aaKnown RBP16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 TXNRD2Q9NNW7 524 aa16.7■□□□□ 0.26
CHRDL2-205ENST00000528471 PARP14Q460N5 1801 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 GJB1P08034 283 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 ZFYP08048 801 aaPredicted RBP16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 ERVK-24P63145 666 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 APPBP2Q92624 585 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
CHRDL2-205ENST00000528471 MYH4Q9Y623 1939 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 PEX10O60683 326 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 MAPK4P31152 587 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 GJA8P48165 433 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 SOCS4Q8WXH5 440 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 SHISA4Q96DD7 197 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 ARHGEF10LQ9HCE6 1279 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 RBPJLQ9UBG7 517 aa16.68■□□□□ 0.26
CHRDL2-205ENST00000528471 RLFQ13129 1914 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 HMGCRP04035 888 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 AKR1B1P15121 316 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 MX1P20591 662 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 CDK8P49336 464 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 CCNA1P78396 465 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 ICA1Q05084 483 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 CATSPERGQ6ZRH7 1159 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 STRBPQ96SI9 672 aaKnown RBP16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 RABGAP1Q9Y3P9 1069 aa16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 COL11A1P12107 1806 aaPredicted RBP16.67■□□□□ 0.26
CHRDL2-205ENST00000528471 A0A1W2PRG0 241 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 GPAA1O43292 621 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 CLEC10AQ8IUN9 316 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 PI4K2BQ8TCG2 481 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 OSBP2Q969R2 916 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 GJD2Q9UKL4 321 aa16.66■□□□□ 0.26
CHRDL2-205ENST00000528471 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 GNAT2P19087 354 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 CYP2B6P20813 491 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 TDO2P48775 406 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 WDR78Q5VTH9 848 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 GIMAP6Q6P9H5 292 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 GPR142Q7Z601 462 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 GCC1Q96CN9 775 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 PORCNQ9H237 461 aa16.65■□□□□ 0.26
CHRDL2-205ENST00000528471 SPDYE16A6NNV3 312 aaPredicted RBP16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 APPP05067 770 aa16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 Q3C1V9 767 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms