RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 PABPC4Q13310 644 aaKnown RBP eCLIP18.2■□□□□ 0.57e-6■■■□□ 16
PUF60-212ENST00000528320 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
PUF60-212ENST00000528320 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
PUF60-212ENST00000528320 PLEKHM2Q8IWE5 1019 aa18.2■□□□□ 0.5
PUF60-212ENST00000528320 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
PUF60-212ENST00000528320 UPF2Q9HAU5 1272 aaKnown RBP18.2■□□□□ 0.5
PUF60-212ENST00000528320 TTC41PQ6P2S7 1318 aa18.2■□□□□ 0.5
PUF60-212ENST00000528320 USP17L5A8MUK1 530 aa18.19■□□□□ 0.5
PUF60-212ENST00000528320 ASNSP08243 561 aa18.19■□□□□ 0.5
PUF60-212ENST00000528320 USP5P45974 858 aa18.19■□□□□ 0.5
PUF60-212ENST00000528320 KBTBD3Q8NAB2 608 aa18.19■□□□□ 0.5
PUF60-212ENST00000528320 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
PUF60-212ENST00000528320 SERPINB13Q9UIV8 391 aa18.19■□□□□ 0.5
PUF60-212ENST00000528320 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
PUF60-212ENST00000528320 EVI5O60447 810 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 SHMT1P34896 483 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 EVX2Q03828 476 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.18■□□□□ 0.58e-8■■■■□ 25
PUF60-212ENST00000528320 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
PUF60-212ENST00000528320 ARMT1Q9H993 441 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 STAP2Q9UGK3 403 aa18.18■□□□□ 0.5
PUF60-212ENST00000528320 A0A1W2PPC1 479 aa18.17■□□□□ 0.5
PUF60-212ENST00000528320 PRKAB2O43741 272 aa18.17■□□□□ 0.5
PUF60-212ENST00000528320 HMGCS2P54868 508 aa18.17■□□□□ 0.5
PUF60-212ENST00000528320 SDR42E1Q8WUS8 393 aa18.17■□□□□ 0.5
PUF60-212ENST00000528320 ATP8A2Q9NTI2 1148 aa18.17■□□□□ 0.5
PUF60-212ENST00000528320 ZBTB21Q9ULJ3 1066 aa18.17■□□□□ 0.5
PUF60-212ENST00000528320 ATAD5Q96QE3 1844 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 MBD4O95243 580 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 BACE1P56817 501 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 TTC22Q5TAA0 569 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 PAWRQ96IZ0 340 aaKnown RBP18.16■□□□□ 0.5
PUF60-212ENST00000528320 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
PUF60-212ENST00000528320 AS3MTQ9HBK9 375 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 GJD2Q9UKL4 321 aa18.16■□□□□ 0.5
PUF60-212ENST00000528320 MYH7P12883 1935 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 HMGCRP04035 888 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 GUCY1A2P33402 732 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 ZSCAN25Q6NSZ9 544 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 NECAB2Q7Z6G3 386 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 CRACR2BQ8N4Y2 399 aaPredicted RBP18.15■□□□□ 0.5
PUF60-212ENST00000528320 ANKLE1Q8NAG6 615 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 OSBP2Q969R2 916 aa18.15■□□□□ 0.5
PUF60-212ENST00000528320 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
PUF60-212ENST00000528320 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■□□□ 13.6
PUF60-212ENST00000528320 LOC285556D6RIA3 1793 aa18.14■□□□□ 0.5
PUF60-212ENST00000528320 LAMA3Q16787 3333 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 SMIM22K7EJ46 135 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 GLRX3O76003 335 aaKnown RBP18.14■□□□□ 0.49
PUF60-212ENST00000528320 GDF11O95390 407 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 HOXA7P31268 230 aaPredicted RBP18.14■□□□□ 0.49
PUF60-212ENST00000528320 C12orf60Q5U649 245 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 MCM9Q9NXL9 1143 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
PUF60-212ENST00000528320 C19orf81C9J6K1 198 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 RNF113AO15541 343 aaKnown RBP18.13■□□□□ 0.49
PUF60-212ENST00000528320 GH2P01242 217 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 CYP2D6P10635 497 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 MX1P20591 662 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 PDE1AP54750 535 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 HMX1Q9NP08 348 aaPredicted RBP18.13■□□□□ 0.49
PUF60-212ENST00000528320 RPTORQ8N122 1335 aa18.13■□□□□ 0.49
PUF60-212ENST00000528320 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 CDC45O75419 566 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 ZFYP08048 801 aaPredicted RBP18.12■□□□□ 0.49
PUF60-212ENST00000528320 CERKLQ49MI3 558 aaPredicted RBP18.12■□□□□ 0.49
PUF60-212ENST00000528320 POTEEQ6S8J3 1075 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 APPBP2Q92624 585 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 C12orf42Q96LP6 360 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 EMILIN3Q9NT22 766 aa18.12■□□□□ 0.49
PUF60-212ENST00000528320 USP17L10C9JJH3 530 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 USP17L12C9JPN9 530 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 USP17L21D6R901 530 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 ERC2O15083 957 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
PUF60-212ENST00000528320 IRX3P78415 501 aaPredicted RBP18.11■□□□□ 0.49
PUF60-212ENST00000528320 MTMR2Q13614 643 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 GIMAP6Q6P9H5 292 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 SIAH1Q8IUQ4 282 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 P2RX7Q99572 595 aaKnown RBP18.11■□□□□ 0.49
PUF60-212ENST00000528320 TMOD4Q9NZQ9 345 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 NAV1Q8NEY1 1877 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 A0A0C4DFX4 3053 aa18.11■□□□□ 0.49
PUF60-212ENST00000528320 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 SBK1Q52WX2 424 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 CTR9Q6PD62 1173 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 TICAM2Q86XR7 235 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 GPRC5AQ8NFJ5 357 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 DIS3LQ8TF46 1054 aaKnown RBP18.1■□□□□ 0.49
PUF60-212ENST00000528320 TRIM34Q9BYJ4 488 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 NBPF3Q9H094 633 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 KIAA1683Q9H0B3 1180 aa18.1■□□□□ 0.49
PUF60-212ENST00000528320 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms