RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 TMOD2Q9NZR1 351 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 RCOR1Q9UKL0 485 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 LAMB1P07942 1786 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 MMP1P03956 469 aa16.41■□□□□ 0.22
CHEK1-210ENST00000528276 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
CHEK1-210ENST00000528276 TCP10Q12799 353 aa16.41■□□□□ 0.22
CHEK1-210ENST00000528276 CFAP100Q494V2 611 aa16.41■□□□□ 0.22
CHEK1-210ENST00000528276 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
CHEK1-210ENST00000528276 NFIAQ12857 509 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
CHEK1-210ENST00000528276 KCNG4Q8TDN1 519 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 TMEM47Q9BQJ4 181 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 TAOK3Q9H2K8 898 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 GRPEL1Q9HAV7 217 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 NAV1Q8NEY1 1877 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 KIF28PB7ZC32 967 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
CHEK1-210ENST00000528276 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
CHEK1-210ENST00000528276 LRSAM1Q6UWE0 723 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 DIS3L2Q8IYB7 885 aaKnown RBP16.4■□□□□ 0.22
CHEK1-210ENST00000528276 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
CHEK1-210ENST00000528276 UBE2Q2LH0YL09 131 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 PSMD14O00487 310 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 U2AF2P26368 475 aaKnown RBP eCLIP16.39■□□□□ 0.211e-9■■□□□ 14.5
CHEK1-210ENST00000528276 CACNB3P54284 484 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 GABPAQ06546 454 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHEK1-210ENST00000528276 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHEK1-210ENST00000528276 FOXP1Q9H334 677 aaPredicted RBP16.39■□□□□ 0.21
CHEK1-210ENST00000528276 PI4KBQ9UBF8 816 aa16.39■□□□□ 0.21
CHEK1-210ENST00000528276 YEATS4O95619 227 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 ANP32BQ92688 251 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 EHD4Q9H223 541 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 hCG_1642624A0A1W2PR95 340 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 PARP1P09874 1014 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 FUT2Q10981 343 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 GRM4Q14833 912 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
CHEK1-210ENST00000528276 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 PCDHAC2Q9Y5I4 1007 aa16.38■□□□□ 0.21
CHEK1-210ENST00000528276 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
CHEK1-210ENST00000528276 PSDA5PKW4 1024 aaPredicted RBP16.37■□□□□ 0.21
CHEK1-210ENST00000528276 BTBD18B2RXH4 712 aa16.37■□□□□ 0.21
CHEK1-210ENST00000528276 SPTLC2O15270 562 aa16.37■□□□□ 0.21
CHEK1-210ENST00000528276 KRT2P35908 639 aa16.37■□□□□ 0.21
CHEK1-210ENST00000528276 PGBD1Q96JS3 809 aa16.37■□□□□ 0.21
CHEK1-210ENST00000528276 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
CHEK1-210ENST00000528276 SCG2P13521 617 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
CHEK1-210ENST00000528276 FOXP4Q8IVH2 680 aaPredicted RBP16.36■□□□□ 0.21
CHEK1-210ENST00000528276 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
CHEK1-210ENST00000528276 LINC00301Q8NCQ3 95 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 AGBL3Q8NEM8 1001 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 UPF1Q92900 1129 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHEK1-210ENST00000528276 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
CHEK1-210ENST00000528276 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 TSPY26PQ9H489 355 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 MTMR4Q9NYA4 1195 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
CHEK1-210ENST00000528276 MYO1BO43795 1136 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 ENTPD3O75355 529 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 TTLL1O95922 423 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 AKR1B1P15121 316 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 LIG1P18858 919 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 NLRP5P59047 1200 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 PKN1Q16512 942 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 RILPL1Q5EBL4 403 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 ZFPM1Q8IX07 1006 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 TNMDQ9H2S6 317 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
CHEK1-210ENST00000528276 PLIN4Q96Q06 1357 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
CHEK1-210ENST00000528276 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms