RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
CAPN1-212ENST00000527887 SHISA4Q96DD7 197 aa17.11■□□□□ 0.33
CAPN1-212ENST00000527887 RBPJLQ9UBG7 517 aa17.11■□□□□ 0.33
CAPN1-212ENST00000527887 RABGAP1Q9Y3P9 1069 aa17.11■□□□□ 0.33
CAPN1-212ENST00000527887 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CAPN1-212ENST00000527887 HMGCRP04035 888 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 ERVK-9P63128 1117 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 ERVK-24P63145 666 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 CCNA1P78396 465 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 TMEM179Q6ZVK1 233 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 UBE2Q1Q7Z7E8 422 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
CAPN1-212ENST00000527887 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 HTATIP2Q9BUP3 242 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 PAK6Q9NQU5 681 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-212ENST00000527887 ATAD5Q96QE3 1844 aa17.1■□□□□ 0.33
CAPN1-212ENST00000527887 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
CAPN1-212ENST00000527887 MBD4O95243 580 aa17.09■□□□□ 0.33
CAPN1-212ENST00000527887 TXNRD2Q9NNW7 524 aa17.09■□□□□ 0.33
CAPN1-212ENST00000527887 CDK5RAP2Q96SN8 1893 aa17.09■□□□□ 0.33
CAPN1-212ENST00000527887 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-212ENST00000527887 VCAM1P19320 739 aa17.08■□□□□ 0.32
CAPN1-212ENST00000527887 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
CAPN1-212ENST00000527887 SEPT2Q15019 361 aa17.08■□□□□ 0.32
CAPN1-212ENST00000527887 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.32
CAPN1-212ENST00000527887 C12orf60Q5U649 245 aa17.08■□□□□ 0.32
CAPN1-212ENST00000527887 ACER1Q8TDN7 264 aa17.08■□□□□ 0.32
CAPN1-212ENST00000527887 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 MPHOSPH10O00566 681 aaKnown RBP17.07■□□□□ 0.32
CAPN1-212ENST00000527887 TFRCP02786 760 aaKnown RBP17.07■□□□□ 0.32
CAPN1-212ENST00000527887 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-212ENST00000527887 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
CAPN1-212ENST00000527887 Q3C1V9 767 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 CRISPLD2Q9H0B8 497 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 HMX1Q9NP08 348 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-212ENST00000527887 HOXC10Q9NYD6 342 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 MGAMO43451 1857 aa17.07■□□□□ 0.32
CAPN1-212ENST00000527887 MYH1P12882 1939 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 PRKAB2O43741 272 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-212ENST00000527887 PLEKHH3Q7Z736 793 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 ANKLE1Q8NAG6 615 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 LPAR1Q92633 364 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 DEFB118Q96PH6 123 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
CAPN1-212ENST00000527887 ARHGEF10LQ9HCE6 1279 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
CAPN1-212ENST00000527887 TTC41PQ6P2S7 1318 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 USP17L21D6R901 530 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 CYP2D6P10635 497 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 RGS2P41220 211 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 COG2Q14746 738 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 C16orf86Q6ZW13 317 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 GPR142Q7Z601 462 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 USP6NLQ92738 828 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 DPF3Q92784 378 aa17.05■□□□□ 0.32
CAPN1-212ENST00000527887 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
CAPN1-212ENST00000527887 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-212ENST00000527887 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
CAPN1-212ENST00000527887 ARPP21Q9UBL0 812 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-212ENST00000527887 A0A1W2PRG0 241 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 ERC2O15083 957 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 CYP2B6P20813 491 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 CDK8P49336 464 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 SBK1Q52WX2 424 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 MORN1Q5T089 497 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 APPBP2Q92624 585 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 STRBPQ96SI9 672 aaKnown RBP17.04■□□□□ 0.32
CAPN1-212ENST00000527887 PORCNQ9H237 461 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 NR2E3Q9Y5X4 410 aa17.04■□□□□ 0.32
CAPN1-212ENST00000527887 CNMDO75829 334 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-212ENST00000527887 GNAT2P19087 354 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 SLFNL1Q499Z3 407 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 HABP4Q5JVS0 413 aaKnown RBP17.03■□□□□ 0.32
CAPN1-212ENST00000527887 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 MB21D1Q8N884 522 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 SLC44A5Q8NCS7 719 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 TRIB2Q92519 343 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 DYNLL2Q96FJ2 89 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 PCDHB15Q9Y5E8 787 aa17.03■□□□□ 0.32
CAPN1-212ENST00000527887 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
CAPN1-212ENST00000527887 SLC15A5A6NIM6 579 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 SPDYE16A6NNV3 312 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-212ENST00000527887 RNF113AO15541 343 aaKnown RBP17.02■□□□□ 0.32
CAPN1-212ENST00000527887 AKR1B1P15121 316 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms