RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SESN3P58005 492 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 EXOSC9Q06265 439 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 ZBTB9Q96C00 473 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 NRBF2Q96F24 287 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 PANK2Q9BZ23 570 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 MKNK2Q9HBH9 465 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 SPC25Q9HBM1 224 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 WWC3Q9ULE0 1092 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 IDH1O75874 414 aaKnown RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 TGFB2P61812 414 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 TMCO5AQ8N6Q1 288 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 LEO1Q8WVC0 666 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 OAS2P29728 719 aaKnown RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 GIMAP6Q6P9H5 292 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 NEK11Q8NG66 645 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 ERMNQ8TAM6 284 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 NFE2L2Q16236 605 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 RSBN1LQ6PCB5 846 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 DDX42Q86XP3 938 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC117Q8IWD4 279 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 RPAP2Q8IXW5 612 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 ATP6V0A1Q93050 837 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 RNF41Q9H4P4 317 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 ZSCAN16Q9H4T2 348 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 ZFYVE1Q9HBF4 777 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 HNRNPCL2B2RXH8 293 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 HNRNPCL1O60812 293 aaKnown RBP8.03□□□□□ -1.12
CTNND1-216ENST00000527467 LDHCP07864 332 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 SKIP12755 728 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 SERPINB6P35237 376 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 ANKRD2Q9GZV1 360 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 SUFUQ9UMX1 484 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 ANGPTL3Q9Y5C1 460 aa8.03□□□□□ -1.12
CTNND1-216ENST00000527467 KRT10P13645 584 aa8.02□□□□□ -1.12
CTNND1-216ENST00000527467 DPP8Q6V1X1 898 aaPredicted RBP8.02□□□□□ -1.12
CTNND1-216ENST00000527467 HEATR3Q7Z4Q2 680 aa8.02□□□□□ -1.12
CTNND1-216ENST00000527467 USHBP1Q8N6Y0 703 aa8.02□□□□□ -1.12
CTNND1-216ENST00000527467 EVI5O60447 810 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 GLRX3O76003 335 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 FAM13AO94988 1023 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 VEGFAP15692 232 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 KRT15P19012 456 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 STX2P32856 288 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 ARID5AQ03989 594 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 OCA2Q04671 838 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PAK2Q13177 524 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PABPC4Q13310 644 aaKnown RBP eCLIP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 CERS3Q8IU89 383 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 MAP7D3Q8IWC1 876 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 AOPEPQ8N6M6 819 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 MRRFQ96E11 262 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 TSC22D3Q99576 134 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 NAPBQ9H115 298 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 RTL1A6NKG5 1358 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 LMTK2Q8IWU2 1503 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PLSCR1O15162 318 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PPIP5K2O43314 1243 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 POLR3DP05423 398 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 CLTAP09496 248 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 LIG3P49916 1009 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 DYNC1I2Q13409 638 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 JADE1Q6IE81 842 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 CNGA4Q8IV77 575 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 TNS4Q8IZW8 715 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PPP4R1Q8TF05 950 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 NAPGQ99747 312 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 SLC4A2P04920 1241 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 RPSAP08865 295 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 NBPF7P0C2Y1 421 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 XRCC6P12956 609 aaKnown RBP eCLIP8.02□□□□□ -1.132e-8■□□□□ 8.5
CTNND1-216ENST00000527467 KCNA4P22459 653 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 IARSP41252 1262 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PMS1P54277 932 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 ZNF804AQ7Z570 1209 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 KIAA2013Q8IYS2 634 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 LRGUKQ96M69 825 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 PAIP2BQ9ULR5 123 aaKnown RBP8.02□□□□□ -1.13
CTNND1-216ENST00000527467 ORC6Q9Y5N6 252 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.13
CTNND1-216ENST00000527467 TET3O43151 1660 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 GTPBP10A4D1E9 387 aaKnown RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 GJB2P29033 226 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 CRACR2BQ8N4Y2 399 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 SH3GL2Q99962 352 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 SLC5A4Q9NY91 659 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 ZBBXA8MT70 800 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 STK10O94804 968 aaKnown RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 MX1P20591 662 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 HOXC9P31274 260 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 BLVRAP53004 296 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 FLOT2Q14254 428 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 HDGFL1Q5TGJ6 251 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 CENPKQ9BS16 269 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms