RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 DDRGK1Q96HY6 314 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 FEZ1Q99689 392 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 ARMT1Q9H993 441 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 MBD4O95243 580 aa16.14■□□□□ 0.17
CAPN1-207ENST00000527189 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
CAPN1-207ENST00000527189 RBPJLQ9UBG7 517 aa16.14■□□□□ 0.17
CAPN1-207ENST00000527189 MAPK4P31152 587 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 TMEM179Q6ZVK1 233 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 KBTBD3Q8NAB2 608 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
CAPN1-207ENST00000527189 DDX60LQ5H9U9 1706 aaKnown RBP16.13■□□□□ 0.17
CAPN1-207ENST00000527189 PRKAB2O43741 272 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 SGPL1O95470 568 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 INHAP05111 366 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 XRCC5P13010 732 aaKnown RBP16.12■□□□□ 0.17
CAPN1-207ENST00000527189 ELNP15502 786 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 ERVK-24P63145 666 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 SEPT2Q15019 361 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 LBX2Q6XYB7 198 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 SLC17A8Q8NDX2 589 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 ACER1Q8TDN7 264 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
CAPN1-207ENST00000527189 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
CAPN1-207ENST00000527189 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 USP17L21D6R901 530 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 HMGCRP04035 888 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 ZFYP08048 801 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 VCAM1P19320 739 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 CCNA1P78396 465 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 Q3C1V9 767 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 GIMAP6Q6P9H5 292 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 PAK6Q9NQU5 681 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-207ENST00000527189 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
CAPN1-207ENST00000527189 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
CAPN1-207ENST00000527189 ERC2O15083 957 aa16.1■□□□□ 0.17
CAPN1-207ENST00000527189 CYP2D6P10635 497 aa16.1■□□□□ 0.17
CAPN1-207ENST00000527189 ZYXQ15942 572 aaKnown RBP16.1■□□□□ 0.17
CAPN1-207ENST00000527189 UBE2Q1Q7Z7E8 422 aa16.1■□□□□ 0.17
CAPN1-207ENST00000527189 STRBPQ96SI9 672 aaKnown RBP16.1■□□□□ 0.17
CAPN1-207ENST00000527189 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
CAPN1-207ENST00000527189 HOXC10Q9NYD6 342 aa16.1■□□□□ 0.17
CAPN1-207ENST00000527189 RNF113AO15541 343 aaKnown RBP16.09■□□□□ 0.17
CAPN1-207ENST00000527189 GLRX3O76003 335 aaKnown RBP16.09■□□□□ 0.17
CAPN1-207ENST00000527189 CDK8P49336 464 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 EVX2Q03828 476 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 COG2Q14746 738 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 SBK1Q52WX2 424 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 C16orf86Q6ZW13 317 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 APPBP2Q92624 585 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 LPAR1Q92633 364 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 PAGR1Q9BTK6 254 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 ARPP21Q9UBL0 812 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-207ENST00000527189 VCANP13611 3396 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
CAPN1-207ENST00000527189 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 H0YGN5 161 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 CHGBP05060 677 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 GNAT2P19087 354 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 AAMPQ13685 434 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 CTR9Q6PD62 1173 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 GPR142Q7Z601 462 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 PLEKHH3Q7Z736 793 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 USP6NLQ92738 828 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 HTATIP2Q9BUP3 242 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-207ENST00000527189 TMX2Q9Y320 296 aa16.08■□□□□ 0.16
CAPN1-207ENST00000527189 MYH7P12883 1935 aa16.07■□□□□ 0.16
CAPN1-207ENST00000527189 TFRCP02786 760 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms