RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 MCTP1Q6DN14 999 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 FAM83AQ86UY5 434 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 CRACR2BQ8N4Y2 399 aaPredicted RBP23.86■■□□□ 1.41
SMCO4-203ENST00000526869 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 CTCFLQ8NI51 663 aaPredicted RBP23.86■■□□□ 1.41
SMCO4-203ENST00000526869 SYT17Q9BSW7 474 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 MYOZ2Q9NPC6 264 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 RESTQ13127 1097 aa23.85■■□□□ 1.41
SMCO4-203ENST00000526869 ARHGAP27Q6ZUM4 889 aa23.85■■□□□ 1.41
SMCO4-203ENST00000526869 NBPF11Q86T75 865 aa23.85■■□□□ 1.41
SMCO4-203ENST00000526869 C8orf76Q96K31 380 aa23.85■■□□□ 1.41
SMCO4-203ENST00000526869 RNF26Q9BY78 433 aaPredicted RBP23.85■■□□□ 1.41
SMCO4-203ENST00000526869 TOP1P11387 765 aaKnown RBP23.84■■□□□ 1.41
SMCO4-203ENST00000526869 GMPSP49915 693 aaPredicted RBP23.84■■□□□ 1.41
SMCO4-203ENST00000526869 SKOR2Q2VWA4 1001 aaPredicted RBP23.84■■□□□ 1.41
SMCO4-203ENST00000526869 TMTC3Q6ZXV5 915 aa23.84■■□□□ 1.41
SMCO4-203ENST00000526869 ZSCAN29Q8IWY8 852 aaPredicted RBP23.84■■□□□ 1.41
SMCO4-203ENST00000526869 FBXO18Q8NFZ0 1043 aa23.84■■□□□ 1.41
SMCO4-203ENST00000526869 ALG1Q9BT22 464 aa23.84■■□□□ 1.41
SMCO4-203ENST00000526869 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.84■■□□□ 1.41
SMCO4-203ENST00000526869 TRIM34Q9BYJ4 488 aa23.84■■□□□ 1.41
SMCO4-203ENST00000526869 HERC5Q9UII4 1024 aaKnown RBP23.84■■□□□ 1.41
SMCO4-203ENST00000526869 CNTNAP1P78357 1384 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 DEXIO95424 95 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 AKR1B1P15121 316 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 GNAQP50148 359 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 FUT2Q10981 343 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 GRM4Q14833 912 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 TATDN1Q6P1N9 297 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 TMEM87AQ8NBN3 555 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 PHKBQ93100 1093 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 CEP95Q96GE4 821 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 TMEM47Q9BQJ4 181 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 SLC26A6Q9BXS9 759 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 DNAJC18Q9H819 358 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 MTMR4Q9NYA4 1195 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 STX8Q9UNK0 236 aa23.83■■□□□ 1.41
SMCO4-203ENST00000526869 SBF1O95248 1867 aa23.82■■□□□ 1.4
SMCO4-203ENST00000526869 CLRN2A0PK11 232 aa23.82■■□□□ 1.4
SMCO4-203ENST00000526869 ZNF541Q9H0D2 1346 aa23.82■■□□□ 1.4
SMCO4-203ENST00000526869 TCP10L2B9ZVM9 353 aa23.81■■□□□ 1.4
SMCO4-203ENST00000526869 WNT10BO00744 389 aa23.81■■□□□ 1.4
SMCO4-203ENST00000526869 CSPP1Q1MSJ5 1256 aa23.81■■□□□ 1.4
SMCO4-203ENST00000526869 LMBRD1Q9NUN5 540 aa23.81■■□□□ 1.4
SMCO4-203ENST00000526869 RBM27Q9P2N5 1060 aaKnown RBP23.81■■□□□ 1.4
SMCO4-203ENST00000526869 PRPF3O43395 683 aaKnown RBP23.8■■□□□ 1.4
SMCO4-203ENST00000526869 TNNI2P48788 182 aa23.8■■□□□ 1.4
SMCO4-203ENST00000526869 FERMT3Q86UX7 667 aa23.8■■□□□ 1.4
SMCO4-203ENST00000526869 CSRNP1Q96S65 589 aa23.8■■□□□ 1.4
SMCO4-203ENST00000526869 LZTS2Q9BRK4 669 aa23.8■■□□□ 1.4
SMCO4-203ENST00000526869 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
SMCO4-203ENST00000526869 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
SMCO4-203ENST00000526869 AKAP17AQ02040 695 aaKnown RBP23.79■■□□□ 1.4
SMCO4-203ENST00000526869 TRIM29Q14134 588 aa23.79■■□□□ 1.4
SMCO4-203ENST00000526869 CERKLQ49MI3 558 aaPredicted RBP23.79■■□□□ 1.4
SMCO4-203ENST00000526869 ATL3Q6DD88 541 aa23.79■■□□□ 1.4
SMCO4-203ENST00000526869 MICALL2Q8IY33 904 aa23.79■■□□□ 1.4
SMCO4-203ENST00000526869 GPC2Q8N158 579 aa23.79■■□□□ 1.4
SMCO4-203ENST00000526869 CNOT7Q9UIV1 285 aaKnown RBP23.79■■□□□ 1.4
SMCO4-203ENST00000526869 CNTNAP5Q8WYK1 1306 aa23.79■■□□□ 1.4
SMCO4-203ENST00000526869 TRAK2O60296 914 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 TBC1D12O60347 775 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 PLEKHA8P1O95397 391 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 TTLL1O95922 423 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 KRT85P78386 507 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 TNFAIP1Q13829 316 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 NBPF9Q3BBW0 867 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 VEZTQ9HBM0 779 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 MYH15Q9Y2K3 1946 aa23.78■■□□□ 1.4
SMCO4-203ENST00000526869 MYH6P13533 1939 aa23.77■■□□□ 1.4
SMCO4-203ENST00000526869 DNM1Q05193 864 aaKnown RBP23.77■■□□□ 1.4
SMCO4-203ENST00000526869 TMEM179Q6ZVK1 233 aa23.77■■□□□ 1.4
SMCO4-203ENST00000526869 BRAPQ7Z569 592 aa23.77■■□□□ 1.4
SMCO4-203ENST00000526869 MAD2L2Q9UI95 211 aa23.77■■□□□ 1.4
SMCO4-203ENST00000526869 SHTN1A0MZ66 631 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 PALM3A6NDB9 673 aaPredicted RBP23.76■■□□□ 1.39
SMCO4-203ENST00000526869 H7C1D1 291 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 SMARCA1P28370 1054 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 FOSBP53539 338 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 GUCY1B3Q02153 619 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 KRT40Q6A162 431 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 SRBD1Q8N5C6 995 aaKnown RBP23.76■■□□□ 1.39
SMCO4-203ENST00000526869 CHAMP1Q96JM3 812 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 KANSL2Q9H9L4 492 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 NYAP2Q9P242 653 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 PGAP2Q9UHJ9 254 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 CNPY2Q9Y2B0 182 aa23.76■■□□□ 1.39
SMCO4-203ENST00000526869 PRPF40AO75400 957 aaKnown RBP23.75■■□□□ 1.39
SMCO4-203ENST00000526869 MAP3K10Q02779 954 aa23.75■■□□□ 1.39
SMCO4-203ENST00000526869 MKL1Q969V6 931 aa23.75■■□□□ 1.39
SMCO4-203ENST00000526869 AIFM3Q96NN9 605 aa23.75■■□□□ 1.39
SMCO4-203ENST00000526869 SCAND2PQ9GZW5 306 aaPredicted RBP23.75■■□□□ 1.39
SMCO4-203ENST00000526869 SYNPO2Q9UMS6 1093 aa23.75■■□□□ 1.39
SMCO4-203ENST00000526869 GOLGB1Q14789 3259 aaKnown RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 MPHOSPH10O00566 681 aaKnown RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 PARP1P09874 1014 aaKnown RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 SNHG28P0DPA3 235 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 YBX3P16989 372 aaKnown RBP eCLIP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 XBP1P17861 261 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 KIF23Q02241 960 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms