RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 ERVK-9P63128 1117 aa25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 ERVK-24P63145 666 aa25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 ABCB5Q2M3G0 1257 aa25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 CERKLQ49MI3 558 aaPredicted RBP25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 GPRC5AQ8NFJ5 357 aa25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 HAUS7Q99871 368 aa25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 DCP1AQ9NPI6 582 aaPredicted RBP25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 PAG1Q9NWQ8 432 aa25.64■■□□□ 1.7
PACSIN3-203ENST00000525725 VCAM1P19320 739 aa25.63■■□□□ 1.69
PACSIN3-203ENST00000525725 ADD2P35612 726 aa25.63■■□□□ 1.69
PACSIN3-203ENST00000525725 MAP3K21Q5TCX8 1036 aa25.63■■□□□ 1.69
PACSIN3-203ENST00000525725 LBX2Q6XYB7 198 aa25.63■■□□□ 1.69
PACSIN3-203ENST00000525725 TRIB2Q92519 343 aa25.63■■□□□ 1.69
PACSIN3-203ENST00000525725 USP6NLQ92738 828 aa25.63■■□□□ 1.69
PACSIN3-203ENST00000525725 XRCC5P13010 732 aaKnown RBP25.62■■□□□ 1.69
PACSIN3-203ENST00000525725 USP14P54578 494 aa25.62■■□□□ 1.69
PACSIN3-203ENST00000525725 ACER1Q8TDN7 264 aa25.62■■□□□ 1.69
PACSIN3-203ENST00000525725 SDR42E1Q8WUS8 393 aa25.62■■□□□ 1.69
PACSIN3-203ENST00000525725 DEFB118Q96PH6 123 aa25.62■■□□□ 1.69
PACSIN3-203ENST00000525725 FEZ1Q99689 392 aa25.62■■□□□ 1.69
PACSIN3-203ENST00000525725 CNMDO75829 334 aa25.61■■□□□ 1.69
PACSIN3-203ENST00000525725 MAPK4P31152 587 aa25.61■■□□□ 1.69
PACSIN3-203ENST00000525725 RAB3GAP1Q15042 981 aa25.61■■□□□ 1.69
PACSIN3-203ENST00000525725 HTATIP2Q9BUP3 242 aa25.61■■□□□ 1.69
PACSIN3-203ENST00000525725 PORCNQ9H237 461 aa25.61■■□□□ 1.69
PACSIN3-203ENST00000525725 MCM9Q9NXL9 1143 aa25.61■■□□□ 1.69
PACSIN3-203ENST00000525725 COL11A1P12107 1806 aaPredicted RBP25.6■■□□□ 1.69
PACSIN3-203ENST00000525725 FXR1P51114 621 aaKnown RBP eCLIP25.6■■□□□ 1.69
PACSIN3-203ENST00000525725 TRIM32Q13049 653 aa25.6■■□□□ 1.69
PACSIN3-203ENST00000525725 COLQQ9Y215 455 aaPredicted RBP25.6■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L15C9J2P7 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L13C9JLJ4 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L11C9JVI0 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L18D6R9N7 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L22D6RA61 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L17D6RBQ6 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L19D6RCP7 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L20D6RJB6 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 POLR3DP05423 398 aaPredicted RBP25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 USP17L24Q0WX57 530 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 ZYXQ15942 572 aaKnown RBP25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 Q3C1V9 767 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 MORN1Q5T089 497 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 LRRCC1Q9C099 1032 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 BOLA2Q9H3K6 86 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 RABGAP1Q9Y3P9 1069 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 RPTORQ8N122 1335 aa25.59■■□□□ 1.69
PACSIN3-203ENST00000525725 MBD4O95243 580 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 SEPT2Q15019 361 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 SLFNL1Q499Z3 407 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 CATSPERGQ6ZRH7 1159 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 GPR142Q7Z601 462 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 NUDT12Q9BQG2 462 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 PRO3102Q9H379 93 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 ARMT1Q9H993 441 aa25.58■■□□□ 1.69
PACSIN3-203ENST00000525725 DNAH12Q6ZR08 3092 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 SPDYE16A6NNV3 312 aaPredicted RBP25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 CYP2D6P10635 497 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 UBE3CQ15386 1083 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 ANKLE1Q8NAG6 615 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 SLC44A5Q8NCS7 719 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 APBA2Q99767 749 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 CABP5Q9NP86 173 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 ATP8A2Q9NTI2 1148 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 SWAP70Q9UH65 585 aa25.57■■□□□ 1.68
PACSIN3-203ENST00000525725 A0A1W2PRG0 241 aa25.56■■□□□ 1.68
PACSIN3-203ENST00000525725 CHGBP05060 677 aa25.56■■□□□ 1.68
PACSIN3-203ENST00000525725 MNX1P50219 401 aaPredicted RBP25.56■■□□□ 1.68
PACSIN3-203ENST00000525725 PAGR1Q9BTK6 254 aa25.56■■□□□ 1.68
PACSIN3-203ENST00000525725 PRKAB2O43741 272 aa25.55■■□□□ 1.68
PACSIN3-203ENST00000525725 TMEM179Q6ZVK1 233 aa25.55■■□□□ 1.68
PACSIN3-203ENST00000525725 DIS3LQ8TF46 1054 aaKnown RBP25.55■■□□□ 1.68
PACSIN3-203ENST00000525725 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
PACSIN3-203ENST00000525725 PRKAR2AP13861 404 aaKnown RBP25.54■■□□□ 1.68
PACSIN3-203ENST00000525725 CYP2B6P20813 491 aa25.54■■□□□ 1.68
PACSIN3-203ENST00000525725 PLEKHH3Q7Z736 793 aa25.54■■□□□ 1.68
PACSIN3-203ENST00000525725 TRMT44Q8IYL2 757 aaKnown RBP25.54■■□□□ 1.68
PACSIN3-203ENST00000525725 DPF3Q92784 378 aa25.54■■□□□ 1.68
PACSIN3-203ENST00000525725 RPAP3Q9H6T3 665 aaPredicted RBP25.54■■□□□ 1.68
PACSIN3-203ENST00000525725 TFRCP02786 760 aaKnown RBP25.53■■□□□ 1.68
PACSIN3-203ENST00000525725 ZKSCAN1P17029 563 aaPredicted RBP25.53■■□□□ 1.68
PACSIN3-203ENST00000525725 RGS2P41220 211 aa25.53■■□□□ 1.68
PACSIN3-203ENST00000525725 BTBD7Q9P203 1132 aa25.53■■□□□ 1.68
PACSIN3-203ENST00000525725 OGDHLQ9ULD0 1010 aa25.53■■□□□ 1.68
PACSIN3-203ENST00000525725 MYH4Q9Y623 1939 aa25.53■■□□□ 1.68
PACSIN3-203ENST00000525725 SMIM22K7EJ46 135 aa25.52■■□□□ 1.68
PACSIN3-203ENST00000525725 SMARCA5O60264 1052 aaPredicted RBP25.52■■□□□ 1.68
PACSIN3-203ENST00000525725 C12orf60Q5U649 245 aa25.52■■□□□ 1.68
PACSIN3-203ENST00000525725 CHRDL2Q6WN34 429 aa25.52■■□□□ 1.68
PACSIN3-203ENST00000525725 ROBO3Q96MS0 1386 aa25.52■■□□□ 1.68
PACSIN3-203ENST00000525725 ZNFX1Q9P2E3 1918 aaKnown RBP25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 IGHA2P01877 340 aa25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 CCNA1P78396 465 aa25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 C16orf86Q6ZW13 317 aa25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 SIAH1Q8IUQ4 282 aa25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 DYNLL2Q96FJ2 89 aa25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 PAWRQ96IZ0 340 aaKnown RBP25.51■■□□□ 1.67
PACSIN3-203ENST00000525725 DCTPP1Q9H773 170 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms