RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CITED4Q96RK1 184 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 KRTAP4-8Q9BYQ9 185 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 NDFIP2Q9NV92 336 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 MTMR10Q9NXD2 777 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 ANKIB1Q9P2G1 1089 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 NARFQ9UHQ1 456 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-203ENST00000524927 MUC3AQ02505 3323 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 SBNO2Q9Y2G9 1366 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 RBM47A0AV96 593 aaKnown RBP9.75□□□□□ -0.85
NEDD8-203ENST00000524927 E9PSI1 815 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 FKTNO75072 461 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 C2orf69Q8N8R5 385 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 GIPC2Q8TF65 315 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 EDEM1Q92611 657 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 GBA2Q9HCG7 927 aaPredicted RBP9.75□□□□□ -0.85
NEDD8-203ENST00000524927 POLIQ9UNA4 740 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
NEDD8-203ENST00000524927 MICAL2O94851 1124 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 SRGNP10124 158 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 PCSK2P16519 638 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 MZF1P28698 734 aaPredicted RBP9.74□□□□□ -0.85
NEDD8-203ENST00000524927 TTC16Q8NEE8 873 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 MASTLQ96GX5 879 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 FAM13BQ9NYF5 915 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 GPRC5DQ9NZD1 345 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 MKL2Q9ULH7 1088 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
NEDD8-203ENST00000524927 GPC6Q9Y625 555 aaPredicted RBP9.74□□□□□ -0.85
NEDD8-203ENST00000524927 TGFBR3LH3BV60 316 aa9.73□□□□□ -0.85
NEDD8-203ENST00000524927 INTS5Q6P9B9 1019 aaKnown RBP9.73□□□□□ -0.85
NEDD8-203ENST00000524927 LRRC69Q6ZNQ3 347 aa9.73□□□□□ -0.85
NEDD8-203ENST00000524927 ZNF280CQ8ND82 737 aa9.73□□□□□ -0.85
NEDD8-203ENST00000524927 GPR152Q8TDT2 470 aa9.73□□□□□ -0.85
NEDD8-203ENST00000524927 HSH2DQ96JZ2 352 aa9.73□□□□□ -0.85
NEDD8-203ENST00000524927 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
NEDD8-203ENST00000524927 ATP4AP20648 1035 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 ITGB7P26010 798 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 USP5P45974 858 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 MAP3K12Q12852 859 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 DPF3Q92784 378 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 DMRTB1Q96MA1 342 aa9.72□□□□□ -0.85
NEDD8-203ENST00000524927 CACNA1SQ13698 1873 aa9.71□□□□□ -0.85
NEDD8-203ENST00000524927 PDGFAP04085 211 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 ZNF16P17020 682 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-203ENST00000524927 GRIN2CQ14957 1233 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 PRR5LQ6MZQ0 368 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 Q7L0L9 218 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 PGBD3Q8N328 593 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 BTBD6Q96KE9 485 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 GDF2Q9UK05 429 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-203ENST00000524927 TRIM17Q9Y577 477 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 NR2E3Q9Y5X4 410 aa9.71□□□□□ -0.86
NEDD8-203ENST00000524927 SOS1Q07889 1333 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-203ENST00000524927 A0A1W2PNR3 127 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 ERVV-2B6SEH9 535 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 BMP4P12644 408 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 IDH3AP50213 366 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 C8orf34Q49A92 452 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 OTOP1Q7RTM1 612 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 IFNL2Q8IZJ0 200 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 Q8N3U1 123 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 PSMD1Q99460 953 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 PHF24Q9UPV7 400 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 PTPN22Q9Y2R2 807 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
NEDD8-203ENST00000524927 TMEM265A0A087WTH1 108 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 C1QTNF9BB2RNN3 333 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 PHKG2P15735 406 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 FGFR3P22607 806 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 COL19A1Q14993 1142 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 IER5Q5VY09 327 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 EDC4Q6P2E9 1401 aaKnown RBP9.69□□□□□ -0.86
NEDD8-203ENST00000524927 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 RASAL3Q86YV0 1011 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 GOLGA6L1Q8N7Z2 621 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 FAM129BQ96TA1 746 aa9.69□□□□□ -0.86
NEDD8-203ENST00000524927 ATXN7L1Q9ULK2 861 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-203ENST00000524927 CDHR2Q9BYE9 1310 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 TREHO43280 583 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
NEDD8-203ENST00000524927 CHRNA4P43681 627 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 MAPK8P45983 427 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 TM4SF4P48230 202 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 ARSDP51689 593 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 BTLAQ7Z6A9 289 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 CD163Q86VB7 1156 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 GJD3Q8N144 294 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 ZNF333Q96JL9 665 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 NIF3L1Q9GZT8 377 aa9.68□□□□□ -0.86
NEDD8-203ENST00000524927 COL15A1P39059 1388 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 UNCXA6NJT0 531 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 OPLAHO14841 1288 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 449.1 ms