RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 ZNF746Q6NUN9 644 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 SIAH1Q8IUQ4 282 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 CCDC120Q96HB5 630 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 ESR1P03372 595 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 P4HBP07237 508 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 MPZL3Q6UWV2 235 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 ZSWIM5Q9P217 1185 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 PCDHB5Q9Y5E4 795 aa7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 EIF4G3O43432 1585 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-211ENST00000523549 CYP7A1P22680 504 aa7.31□□□□□ -1.24
NSMCE2-211ENST00000523549 ANKLE2Q86XL3 938 aa7.31□□□□□ -1.24
NSMCE2-211ENST00000523549 LRRC56Q8IYG6 542 aaPredicted RBP7.31□□□□□ -1.24
NSMCE2-211ENST00000523549 FBXO15Q8NCQ5 510 aaPredicted RBP7.31□□□□□ -1.24
NSMCE2-211ENST00000523549 TTF2Q9UNY4 1162 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-211ENST00000523549 DNAJC25-GNG10A0A024R161 153 aa7.3□□□□□ -1.24
NSMCE2-211ENST00000523549 AGMOQ6ZNB7 445 aa7.3□□□□□ -1.24
NSMCE2-211ENST00000523549 ZSCAN18Q8TBC5 510 aaPredicted RBP7.3□□□□□ -1.24
NSMCE2-211ENST00000523549 PIWIL2Q8TC59 973 aaKnown RBP7.3□□□□□ -1.24
NSMCE2-211ENST00000523549 XAGE3Q8WTP9 111 aa7.3□□□□□ -1.24
NSMCE2-211ENST00000523549 URB2Q14146 1524 aaKnown RBP7.3□□□□□ -1.24
NSMCE2-211ENST00000523549 CLASP1Q7Z460 1538 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 LDHBP07195 334 aaKnown RBP7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 GNA15P30679 374 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 RALGPS1Q5JS13 557 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 SLC6A19Q695T7 634 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 TMPRSS7Q7RTY8 843 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 TTC6Q86TZ1 520 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 AMIGO3Q86WK7 504 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 Q96M66 194 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 DUSP15Q9H1R2 295 aaPredicted RBP7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 NSUN3Q9H649 340 aaKnown RBP7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
NSMCE2-211ENST00000523549 WASH4PA8MWX3 477 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 ERVFC1P60507 584 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 SEPT6Q14141 434 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 MCATQ8IVS2 390 aaKnown RBP7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 DNAJB8Q8NHS0 232 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 ABHD4Q8TB40 342 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 DIRC2Q96SL1 478 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 KCNK12Q9HB15 430 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 SP110Q9HB58 689 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 SLAMF8Q9P0V8 285 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 AK5Q9Y6K8 562 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 CADPSQ9ULU8 1353 aa7.28□□□□□ -1.24
NSMCE2-211ENST00000523549 NFIBO00712 420 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 HPXP02790 462 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 MED14OSP0DP75 135 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 SRFP11831 508 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 EIF4BP23588 611 aaKnown RBP7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 CCDC85BQ15834 202 aaPredicted RBP7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 GAB4Q2WGN9 574 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 TMEM87BQ96K49 555 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 ADAMTS10Q9H324 1103 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 TMEM59LQ9UK28 342 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 ZCCHC6Q5VYS8 1495 aaKnown RBP7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 TSPOAP1O95153 1857 aa7.27□□□□□ -1.25
NSMCE2-211ENST00000523549 FANCD2Q9BXW9 1451 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 PGRP06401 933 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 ZSCAN22P10073 491 aaPredicted RBP7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 LIG3P49916 1009 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 PPP1R13LQ8WUF5 828 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 DPH2Q9BQC3 489 aaPredicted RBP7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 CD320Q9NPF0 282 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 RNF19AQ9NV58 838 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 CEP131Q9UPN4 1083 aa7.26□□□□□ -1.25
NSMCE2-211ENST00000523549 GAPVD1Q14C86 1478 aa7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 RAC2P15153 192 aa7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 TFE3P19532 575 aaPredicted RBP7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 ACSF2Q96CM8 615 aaPredicted RBP7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 KRTAP4-11Q9BYQ6 195 aa7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 DCP1AQ9NPI6 582 aaPredicted RBP7.25□□□□□ -1.25
NSMCE2-211ENST00000523549 PRPF40AO75400 957 aaKnown RBP7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 TMEM253P0C7T8 217 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 ETV3P41162 512 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 RPL6Q02878 288 aaKnown RBP7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 KCNA1Q09470 495 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 GPR62Q9BZJ7 368 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 MIR1-1HGQ9H1L0 117 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 EPB41L4BQ9H329 900 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 ADAM30Q9UKF2 790 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 TIMELESSQ9UNS1 1208 aa7.24□□□□□ -1.25
NSMCE2-211ENST00000523549 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 ETV2O00321 342 aaPredicted RBP7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 GLDCP23378 1020 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 TPP2P29144 1249 aaPredicted RBP7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 HK2P52789 917 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 TSNAXIP1Q2TAA8 658 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 ATG14Q6ZNE5 492 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 TTLL10Q6ZVT0 673 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 CREG2Q8IUH2 290 aa7.23□□□□□ -1.25
NSMCE2-211ENST00000523549 LMNB1P20700 586 aa7.22□□□□□ -1.25
NSMCE2-211ENST00000523549 PDE4BQ07343 736 aa7.22□□□□□ -1.25
NSMCE2-211ENST00000523549 KCNA10Q16322 511 aa7.22□□□□□ -1.25
NSMCE2-211ENST00000523549 LILRA6Q6PI73 481 aa7.22□□□□□ -1.25
NSMCE2-211ENST00000523549 RAPGEFL1Q9UHV5 662 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms