RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	RAG1	P15918	1043 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	DIEXF	Q68CQ4	756 aa	Known RBP	7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	INTS3	Q68E01	1043 aa	Known RBP	7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	PRR23C	Q6ZRP0	262 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	CDH24	Q86UP0	819 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	TMEM151A	Q8N4L1	468 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	TOP6BL	Q8N6T0	577 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	C19orf47	Q8N9M1	422 aa	Known RBP	7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	KCT2	Q8NC54	265 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	OR6P1	Q8NGX9	317 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	CYB5D2	Q8WUJ1	264 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	KLHL6	Q8WZ60	621 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	VWCE	Q96DN2	955 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	MIPEP	Q99797	713 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	FAM83C	Q9BQN1	747 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	DUSP23	Q9BVJ7	150 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	ACTR10	Q9NZ32	417 aa		7.09	□□□□□ -1.27
CTNNA1-238	ENST00000523298	YARS	P54577	528 aa	Known RBP	7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	LETMD1	Q6P1Q0	360 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CLEC10A	Q8IUN9	316 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CKAP2L	Q8IYA6	745 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	PHACTR4	Q8IZ21	702 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SLC6A18	Q96N87	628 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	PRDM10	Q9NQV6	1147 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	FAM86C1	Q9NVL1	165 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	RAX	Q9Y2V3	346 aa		7.08	□□□□□ -1.28
CTNNA1-238	ENST00000523298	FAM170B	A6NMN3	283 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	GJB6	O95452	261 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	MAP7	Q14244	749 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	RASA3	Q14644	834 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	NKAPL	Q5M9Q1	402 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	TDRD10	Q5VZ19	366 aa	Known RBP	7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	LARP1B	Q659C4	914 aa	Known RBP	7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CCDC74B	Q96LY2	380 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	HEXIM2	Q96MH2	286 aa	Known RBP	7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SPOCK3	Q9BQ16	436 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	MSRB2	Q9Y3D2	182 aa		7.07	□□□□□ -1.28
CTNNA1-238	ENST00000523298	PRR33	A8MZF0	331 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	LRRN2	O75325	713 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	F13B	P05160	661 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	FAM87A	P0C7U9	286 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	MLEC	Q14165	292 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	BMS1	Q14692	1282 aa	Known RBP	7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	DDR2	Q16832	855 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	TNNI3K	Q59H18	835 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	MFSD2A	Q8NA29	543 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	MFSD14A	Q96MC6	490 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	OSBPL2	Q9H1P3	480 aa		7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	ZNF214	Q9UL59	606 aa	Predicted RBP	7.06	□□□□□ -1.28
CTNNA1-238	ENST00000523298	GIMAP6	Q6P9H5	292 aa		7.05	□□□□□ -1.28
CTNNA1-238	ENST00000523298	PAOX	Q6QHF9	649 aa		7.05	□□□□□ -1.28
CTNNA1-238	ENST00000523298	ZNF765	Q7L2R6	523 aa		7.05	□□□□□ -1.28
CTNNA1-238	ENST00000523298	ZAR1	Q86SH2	424 aa		7.05	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SUSD2	Q9UGT4	822 aa		7.05	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CEP131	Q9UPN4	1083 aa		7.05	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SHOX	O15266	292 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	NBPF6	Q5VWK0	638 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	FBXL6	Q8N531	539 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	NBPF4	Q96M43	638 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298		Q96M66	194 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	KREMEN1	Q96MU8	473 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	TBC1D32	Q96NH3	1257 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	YIPF2	Q9BWQ6	316 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	ZSWIM4	Q9H7M6	989 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SNTG2	Q9NY99	539 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	STOML1	Q9UBI4	398 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SUCO	Q9UBS9	1254 aa	Known RBP	7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	MAPK8IP1	Q9UQF2	711 aa		7.04	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CCDC85C	A6NKD9	419 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298		K7ELQ4	463 aa	Predicted RBP	7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CBFA2T2	O43439	604 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	TP53	P04637	393 aa	Predicted RBP	7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	GBP1	P32455	592 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	PMS1	P54277	932 aa	Known RBP	7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	SNW1	Q13573	536 aa	Known RBP	7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	DCAF15	Q66K64	600 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	RNF43	Q68DV7	783 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	FAM178B	Q8IXR5	827 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	LGR4	Q9BXB1	951 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	TRIM55	Q9BYV6	548 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	KANSL2	Q9H9L4	492 aa		7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.03	□□□□□ -1.28
CTNNA1-238	ENST00000523298	ITGB7	P26010	798 aa		7.02	□□□□□ -1.29
CTNNA1-238	ENST00000523298	KIAA1211L	Q6NV74	962 aa		7.02	□□□□□ -1.29
CTNNA1-238	ENST00000523298	OGFOD3	Q6PK18	319 aa		7.02	□□□□□ -1.29
CTNNA1-238	ENST00000523298	VHLL	Q6RSH7	139 aa		7.02	□□□□□ -1.29
CTNNA1-238	ENST00000523298	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.02	□□□□□ -1.29
CTNNA1-238	ENST00000523298	SIRPG	Q9P1W8	387 aa		7.02	□□□□□ -1.29
CTNNA1-238	ENST00000523298	CLEC3A	O75596	197 aa		7.01	□□□□□ -1.29
CTNNA1-238	ENST00000523298	DDAH1	O94760	285 aa		7.01	□□□□□ -1.29
CTNNA1-238	ENST00000523298	CCNF	P41002	786 aa		7.01	□□□□□ -1.29
CTNNA1-238	ENST00000523298	NFIA	Q12857	509 aa		7.01	□□□□□ -1.29
CTNNA1-238	ENST00000523298	FXN	Q16595	210 aa		7.01	□□□□□ -1.29
CTNNA1-238	ENST00000523298	GNPTAB	Q3T906	1256 aa		7.01	□□□□□ -1.29

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