RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
PVT1-216ENST00000523068 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
PVT1-216ENST00000523068 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 ERC2O15083 957 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 MTFR1Q15390 333 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
PVT1-216ENST00000523068 SLFNL1Q499Z3 407 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
PVT1-216ENST00000523068 RNF208Q9H0X6 261 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 SLC4A4Q9Y6R1 1079 aa13.1□□□□□ -0.31
PVT1-216ENST00000523068 PRKAB2O43741 272 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 GJB1P08034 283 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
PVT1-216ENST00000523068 CCL5P13501 91 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 CAPN2P17655 700 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 SEPT2Q15019 361 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 CCDC17Q96LX7 622 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
PVT1-216ENST00000523068 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
PVT1-216ENST00000523068 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.31
PVT1-216ENST00000523068 USP17L12C9JPN9 530 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 USP17L21D6R901 530 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 RNF113AO15541 343 aaKnown RBP13.08□□□□□ -0.32
PVT1-216ENST00000523068 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
PVT1-216ENST00000523068 CYP2D6P10635 497 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 ELNP15502 786 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 VCAM1P19320 739 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 MAPK4P31152 587 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 GUCY1A2P33402 732 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 GJA8P48165 433 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 ERVK-9P63128 1117 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 ERVK-24P63145 666 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 AAMPQ13685 434 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 ACER1Q8TDN7 264 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 APPBP2Q92624 585 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 ARHGEF10LQ9HCE6 1279 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
PVT1-216ENST00000523068 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
PVT1-216ENST00000523068 CHGBP05060 677 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 INHAP05111 366 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 GNAT2P19087 354 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 CDK8P49336 464 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 CCNA1P78396 465 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 EVX2Q03828 476 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 SLC44A5Q8NCS7 719 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 SOCS4Q8WXH5 440 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
PVT1-216ENST00000523068 CRBNQ96SW2 442 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
PVT1-216ENST00000523068 CWC22Q9HCG8 908 aaKnown RBP13.07□□□□□ -0.32
PVT1-216ENST00000523068 TXNRD2Q9NNW7 524 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 GJD2Q9UKL4 321 aa13.07□□□□□ -0.32
PVT1-216ENST00000523068 HMGCRP04035 888 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 MX1P20591 662 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 ICA1Q05084 483 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 CTR9Q6PD62 1173 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 LBX2Q6XYB7 198 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
PVT1-216ENST00000523068 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
PVT1-216ENST00000523068 LPAR1Q92633 364 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 NUDT12Q9BQG2 462 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 UNC93B1Q9H1C4 597 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
PVT1-216ENST00000523068 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
PVT1-216ENST00000523068 CYP2D7A0A087X1C5 515 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 SGPL1O95470 568 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 XRCC5P13010 732 aaKnown RBP13.05□□□□□ -0.32
PVT1-216ENST00000523068 AKR1B1P15121 316 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
PVT1-216ENST00000523068 COG2Q14746 738 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 Q3C1V9 767 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 SBK1Q52WX2 424 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 ANKRD45Q5TZF3 282 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 PI4K2BQ8TCG2 481 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 OSBP2Q969R2 916 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 HOXC10Q9NYD6 342 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 RLFQ13129 1914 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 GREB1LQ9C091 1923 aaPredicted RBP13.05□□□□□ -0.32
PVT1-216ENST00000523068 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
PVT1-216ENST00000523068 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms