RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 AIDAQ96BJ3 306 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 DENND2AQ9ULE3 1009 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 TPCN1Q9ULQ1 816 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 E7EWF7 191 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 APBA3O96018 575 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 GNAT2P19087 354 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 GJA5P36382 358 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 BAG6P46379 1132 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 PKP1Q13835 747 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 ALX1Q15699 326 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 ME3Q16798 604 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-211ENST00000523062 CRY2Q49AN0 593 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 Q6ZUG5 572 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 TRMT44Q8IYL2 757 aaKnown RBP8.1□□□□□ -1.11
CSMD1-211ENST00000523062 MAGEB6Q8N7X4 407 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 TCEANC2Q96MN5 208 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 LRP2BPQ9P2M1 347 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 ZDHHC9Q9Y397 364 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 COL1A1P02452 1464 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-211ENST00000523062 RGPD3A6NKT7 1758 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-211ENST00000523062 RGPD4Q7Z3J3 1758 aa8.1□□□□□ -1.11
CSMD1-211ENST00000523062 PNPLA7Q6ZV29 1317 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 WDR19Q8NEZ3 1342 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 POLRMTO00411 1230 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 ZNF213O14771 459 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 TRAK2O60296 914 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 IGSF3O75054 1194 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 MBD4O95243 580 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 FGAP02671 866 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 PDIA4P13667 645 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 HIBADHP31937 336 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 DEKP35659 375 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 FGD1P98174 961 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 EXOSC10Q01780 885 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 DDR1Q08345 913 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 ST3GAL1Q11201 340 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 CBLBQ13191 982 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 ZNF827Q17R98 1081 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 RALYLQ86SE5 291 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 GTF3C6Q969F1 213 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 CHMP4CQ96CF2 233 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 RBM17Q96I25 401 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 FAM84BQ96KN1 310 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 STRBPQ96SI9 672 aaKnown RBP8.09□□□□□ -1.11
CSMD1-211ENST00000523062 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 TFCP2L1Q9NZI6 479 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 LEMD3Q9Y2U8 911 aa8.09□□□□□ -1.11
CSMD1-211ENST00000523062 XDHP47989 1333 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 APPP05067 770 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 PDCP20941 246 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 CYP7A1P22680 504 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 GJB2P29033 226 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 HAND2P61296 217 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 TRDNQ13061 729 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-211ENST00000523062 MCTP1Q6DN14 999 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 C15orf52Q6ZUT6 534 aaKnown RBP8.08□□□□□ -1.12
CSMD1-211ENST00000523062 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 NLGN1Q8N2Q7 840 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 FBXL16Q8N461 479 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 NECAB1Q8N987 351 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 NCOA7Q8NI08 942 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 BRF1Q92994 677 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 AGXT2Q9BYV1 514 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 NAPBQ9H115 298 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 RAI14Q9P0K7 980 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-211ENST00000523062 TNS1Q9HBL0 1735 aaKnown RBP8.08□□□□□ -1.12
CSMD1-211ENST00000523062 TAF1P21675 1872 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 LAMA4Q16363 1823 aa8.08□□□□□ -1.12
CSMD1-211ENST00000523062 IRS2Q9Y4H2 1338 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 MYO5AQ9Y4I1 1855 aaKnown RBP8.07□□□□□ -1.12
CSMD1-211ENST00000523062 TIAM2Q8IVF5 1701 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 DUOX1Q9NRD9 1551 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 A0A0G2JLW4 131 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 PATL2C9JE40 543 aaKnown RBP8.07□□□□□ -1.12
CSMD1-211ENST00000523062 STX6O43752 255 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 PFKFB2O60825 505 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ZSCAN22P10073 491 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-211ENST00000523062 SYT1P21579 422 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ATP2B4P23634 1241 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 KLRK1P26718 216 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 HOXA10P31260 410 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-211ENST00000523062 GAS6Q14393 721 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ZNF804AQ7Z570 1209 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 MB21D2Q8IYB1 491 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 LLPHQ9BRT6 129 aaKnown RBP8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ARMT1Q9H993 441 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ABCF2Q9UG63 623 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 ATP6V1DQ9Y5K8 247 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms