RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PTPN18Q99952 460 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 RNF41Q9H4P4 317 aaPredicted RBP14.11□□□□□ -0.15
PVT1-215ENST00000522963 SAGE1Q9NXZ1 904 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 SWAP70Q9UH65 585 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 MYH8P13535 1937 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 ORC4O43929 436 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 ALDH1A1P00352 501 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 PCP11498 1178 aaKnown RBP14.1□□□□□ -0.15
PVT1-215ENST00000522963 RASA1P20936 1047 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 ANAPC15P60006 121 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 CERKLQ49MI3 558 aaPredicted RBP14.1□□□□□ -0.15
PVT1-215ENST00000522963 GADL1Q6ZQY3 521 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
PVT1-215ENST00000522963 PHIPQ8WWQ0 1821 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 USP17L5A8MUK1 530 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 BTBD19C9JJ37 291 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 MPHOSPH10O00566 681 aaKnown RBP14.09□□□□□ -0.15
PVT1-215ENST00000522963 GH2P01242 217 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 JAG1P78504 1218 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 SPP2Q13103 211 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 KRT32Q14532 448 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 TAF1CQ15572 869 aaPredicted RBP14.09□□□□□ -0.15
PVT1-215ENST00000522963 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
PVT1-215ENST00000522963 TATDN1Q6P1N9 297 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 FAM43AQ8N2R8 423 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 JAKMIP1Q96N16 626 aaKnown RBP14.09□□□□□ -0.15
PVT1-215ENST00000522963 KIF2CQ99661 725 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 R3HDMLQ9H3Y0 253 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 TOMM22Q9NS69 142 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 TAOK2Q9UL54 1235 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 KCNH4Q9UQ05 1017 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
PVT1-215ENST00000522963 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
PVT1-215ENST00000522963 B4E1Z4 1266 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 CXCL11O14625 94 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 ASNSP08243 561 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 ABCB5Q2M3G0 1257 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 RALYLQ86SE5 291 aaKnown RBP14.08□□□□□ -0.16
PVT1-215ENST00000522963 MB21D2Q8IYB1 491 aaPredicted RBP14.08□□□□□ -0.16
PVT1-215ENST00000522963 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
PVT1-215ENST00000522963 NCOA7Q8NI08 942 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 NEK1Q96PY6 1258 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 KRT23Q9C075 422 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 CNNM2Q9H8M5 875 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 AS3MTQ9HBK9 375 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 ZNF287Q9HBT7 754 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 CABP5Q9NP86 173 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 ZBTB21Q9ULJ3 1066 aa14.08□□□□□ -0.16
PVT1-215ENST00000522963 LAMB1P07942 1786 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 RANBP6O60518 1105 aaKnown RBP14.07□□□□□ -0.16
PVT1-215ENST00000522963 KDM4AO75164 1064 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 CPA1P15085 419 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 AKR1B1P15121 316 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 TRDNQ13061 729 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 CRHR2Q13324 411 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 CYB5R4Q7L1T6 521 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 ZNF280CQ8ND82 737 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 ESR2Q92731 530 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 PTPRFP10586 1907 aa14.07□□□□□ -0.16
PVT1-215ENST00000522963 LAMA4Q16363 1823 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 GPR25O00155 361 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 PDHXO00330 501 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 CASTP20810 708 aaKnown RBP14.06□□□□□ -0.16
PVT1-215ENST00000522963 PSMA5P28066 241 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 HMGCS2P54868 508 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 ANTXR2P58335 489 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 TFAP4Q01664 338 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 DGKZQ13574 1117 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 ZYXQ15942 572 aaKnown RBP14.06□□□□□ -0.16
PVT1-215ENST00000522963 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
PVT1-215ENST00000522963 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 FEZ1Q99689 392 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
PVT1-215ENST00000522963 ZFYVE28Q9HCC9 887 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 ZSWIM5Q9P217 1185 aa14.06□□□□□ -0.16
PVT1-215ENST00000522963 A0A0G2JLL6 359 aaPredicted RBP14.05□□□□□ -0.16
PVT1-215ENST00000522963 TSPY2A6NKD2 308 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
PVT1-215ENST00000522963 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 EXOSC10Q01780 885 aaKnown RBP14.05□□□□□ -0.16
PVT1-215ENST00000522963 MTMR2Q13614 643 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 SEPT2Q15019 361 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 CHST3Q7LGC8 479 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 PRRT2Q7Z6L0 340 aaPredicted RBP14.05□□□□□ -0.16
PVT1-215ENST00000522963 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 NEDD1Q8NHV4 660 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 ZNF296Q8WUU4 475 aaPredicted RBP14.05□□□□□ -0.16
PVT1-215ENST00000522963 UPF3BQ9BZI7 483 aaKnown RBP14.05□□□□□ -0.16
PVT1-215ENST00000522963 PCNTO95613 3336 aa14.05□□□□□ -0.16
PVT1-215ENST00000522963 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
PVT1-215ENST00000522963 PRC1O43663 620 aa14.04□□□□□ -0.16
PVT1-215ENST00000522963 FKTNO75072 461 aa14.04□□□□□ -0.16
PVT1-215ENST00000522963 HMGB1P09429 215 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms