RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 ZKSCAN1P17029 563 aaPredicted RBP24.69■■□□□ 1.54
SNHG6-205ENST00000521399 USP14P54578 494 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 USP17L24Q0WX57 530 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 RAB3GAP1Q15042 981 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 ZYXQ15942 572 aaKnown RBP24.69■■□□□ 1.54
SNHG6-205ENST00000521399 ABCB5Q2M3G0 1257 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 HSP90AB4PQ58FF6 505 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 MORN1Q5T089 497 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 PLEKHH3Q7Z736 793 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 PANK1Q8TE04 598 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 RABGAP1Q9Y3P9 1069 aa24.69■■□□□ 1.54
SNHG6-205ENST00000521399 RGS2P41220 211 aa24.68■■□□□ 1.54
SNHG6-205ENST00000521399 C7orf61Q8IZ16 206 aa24.68■■□□□ 1.54
SNHG6-205ENST00000521399 MIER1Q8N108 512 aa24.68■■□□□ 1.54
SNHG6-205ENST00000521399 KIAA1683Q9H0B3 1180 aa24.68■■□□□ 1.54
SNHG6-205ENST00000521399 C11orf49Q9H6J7 331 aa24.68■■□□□ 1.54
SNHG6-205ENST00000521399 IL1RAPL2Q9NP60 686 aa24.68■■□□□ 1.54
SNHG6-205ENST00000521399 CNMDO75829 334 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 SHMT1P34896 483 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 PLCD1P51178 756 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 CACNB2Q08289 660 aaPredicted RBP24.67■■□□□ 1.54
SNHG6-205ENST00000521399 TTF1Q15361 905 aaPredicted RBP24.67■■□□□ 1.54
SNHG6-205ENST00000521399 CATSPERGQ6ZRH7 1159 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 RHPN1Q8TCX5 695 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 ACER1Q8TDN7 264 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 CABP5Q9NP86 173 aa24.67■■□□□ 1.54
SNHG6-205ENST00000521399 MAGEB6P1A0A0J9YX57 407 aa24.66■■□□□ 1.54
SNHG6-205ENST00000521399 VCAM1P19320 739 aa24.66■■□□□ 1.54
SNHG6-205ENST00000521399 CCL14Q16627 93 aa24.66■■□□□ 1.54
SNHG6-205ENST00000521399 APBA2Q99767 749 aa24.66■■□□□ 1.54
SNHG6-205ENST00000521399 POLR3DP05423 398 aaPredicted RBP24.65■■□□□ 1.54
SNHG6-205ENST00000521399 CCNA1P78396 465 aa24.65■■□□□ 1.54
SNHG6-205ENST00000521399 GDF15Q99988 308 aa24.65■■□□□ 1.54
SNHG6-205ENST00000521399 CWC22Q9HCG8 908 aaKnown RBP24.65■■□□□ 1.54
SNHG6-205ENST00000521399 NAV1Q8NEY1 1877 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 PDE6AP16499 860 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 GUCY1A2P33402 732 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 GABPAQ06546 454 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 MAP2K5Q13163 448 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 SLC9C2Q5TAH2 1124 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 LBX2Q6XYB7 198 aa24.64■■□□□ 1.54
SNHG6-205ENST00000521399 ZMYND8Q9ULU4 1186 aaPredicted RBP24.64■■□□□ 1.54
SNHG6-205ENST00000521399 ZBED9Q6R2W3 1325 aa24.63■■□□□ 1.53
SNHG6-205ENST00000521399 DNAH12Q6ZR08 3092 aa24.63■■□□□ 1.53
SNHG6-205ENST00000521399 GLRX3O76003 335 aaKnown RBP24.63■■□□□ 1.53
SNHG6-205ENST00000521399 CCND3P30281 292 aaPredicted RBP24.63■■□□□ 1.53
SNHG6-205ENST00000521399 BMP8BP34820 402 aa24.63■■□□□ 1.53
SNHG6-205ENST00000521399 LHX8Q68G74 356 aa24.63■■□□□ 1.53
SNHG6-205ENST00000521399 CLASRPQ8N2M8 674 aaKnown RBP24.63■■□□□ 1.53
SNHG6-205ENST00000521399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNHG6-205ENST00000521399 EDC3Q96F86 508 aaKnown RBP24.63■■□□□ 1.53
SNHG6-205ENST00000521399 CRNKL1Q9BZJ0 848 aaKnown RBP24.63■■□□□ 1.53
SNHG6-205ENST00000521399 PFASO15067 1338 aa24.62■■□□□ 1.53
SNHG6-205ENST00000521399 SOX1O00570 391 aaPredicted RBP24.62■■□□□ 1.53
SNHG6-205ENST00000521399 KIF1BPQ96EK5 621 aa24.62■■□□□ 1.53
SNHG6-205ENST00000521399 MCM9Q9NXL9 1143 aa24.62■■□□□ 1.53
SNHG6-205ENST00000521399 COL6A3P12111 3177 aa24.62■■□□□ 1.53
SNHG6-205ENST00000521399 ZNF532Q9HCE3 1301 aa24.61■■□□□ 1.53
SNHG6-205ENST00000521399 MS4A1P11836 297 aa24.61■■□□□ 1.53
SNHG6-205ENST00000521399 SEPT2Q15019 361 aa24.61■■□□□ 1.53
SNHG6-205ENST00000521399 RPAP3Q9H6T3 665 aaPredicted RBP24.61■■□□□ 1.53
SNHG6-205ENST00000521399 BTBD7Q9P203 1132 aa24.61■■□□□ 1.53
SNHG6-205ENST00000521399 TCRBV5S4A2TA0A5A2 114 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 SLC15A5A6NIM6 579 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 SPDYE16A6NNV3 312 aaPredicted RBP24.6■■□□□ 1.53
SNHG6-205ENST00000521399 APBB1O00213 710 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 GOLIM4O00461 696 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 COL6A1P12109 1028 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 PTPREP23469 700 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 EVX2Q03828 476 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 WDR78Q5VTH9 848 aa24.6■■□□□ 1.53
SNHG6-205ENST00000521399 RPAP2Q8IXW5 612 aaPredicted RBP24.6■■□□□ 1.53
SNHG6-205ENST00000521399 DNAJC2Q99543 621 aaKnown RBP24.6■■□□□ 1.53
SNHG6-205ENST00000521399 IFIT2P09913 472 aaKnown RBP24.59■■□□□ 1.53
SNHG6-205ENST00000521399 SYN1P17600 705 aa24.59■■□□□ 1.53
SNHG6-205ENST00000521399 SDR42E1Q8WUS8 393 aa24.59■■□□□ 1.53
SNHG6-205ENST00000521399 LRCH3Q96II8 777 aa24.59■■□□□ 1.53
SNHG6-205ENST00000521399 DCP1AQ9NPI6 582 aaPredicted RBP24.59■■□□□ 1.53
SNHG6-205ENST00000521399 FLRT1Q9NZU1 646 aa24.59■■□□□ 1.53
SNHG6-205ENST00000521399 IVNS1ABPQ9Y6Y0 642 aa24.59■■□□□ 1.53
SNHG6-205ENST00000521399 A0A1W2PRG0 241 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 MPHOSPH10O00566 681 aaKnown RBP24.58■■□□□ 1.53
SNHG6-205ENST00000521399 HMMRO75330 724 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 HOXC6P09630 235 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 GRB14Q14449 540 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 MFSD14CQ5VZR4 134 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 SIRT2Q8IXJ6 389 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 LCORLQ8N3X6 602 aa24.58■■□□□ 1.53
SNHG6-205ENST00000521399 FRMPD3Q5JV73 1810 aa24.57■■□□□ 1.52
SNHG6-205ENST00000521399 ZBTB40Q9NUA8 1239 aa24.57■■□□□ 1.52
SNHG6-205ENST00000521399 MAGEA10P43363 369 aaPredicted RBP24.56■■□□□ 1.52
SNHG6-205ENST00000521399 HOXC10Q9NYD6 342 aa24.56■■□□□ 1.52
SNHG6-205ENST00000521399 DDX19BQ9UMR2 479 aa24.56■■□□□ 1.52
SNHG6-205ENST00000521399 MYH8P13535 1937 aa24.55■■□□□ 1.52
SNHG6-205ENST00000521399 RAB11FIP3O75154 756 aa24.55■■□□□ 1.52
SNHG6-205ENST00000521399 CYP2D6P10635 497 aa24.55■■□□□ 1.52
SNHG6-205ENST00000521399 ATP2B2Q01814 1243 aa24.55■■□□□ 1.52
SNHG6-205ENST00000521399 COG2Q14746 738 aa24.55■■□□□ 1.52
SNHG6-205ENST00000521399 DIEXFQ68CQ4 756 aaKnown RBP24.55■■□□□ 1.52
SNHG6-205ENST00000521399 NPLOC4Q8TAT6 608 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms