RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 NFKBIEO00221 500 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 ADAM11O75078 769 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 ITPK1Q13572 414 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 FLAD1Q8NFF5 587 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 DDX54Q8TDD1 881 aaKnown RBP5.69□□□□□ -1.5
VPS13B-208ENST00000521037 FAM83CQ9BQN1 747 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 DBNDD2Q9BQY9 259 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 PALLDQ8WX93 1383 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 TIAM2Q8IVF5 1701 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 WNT11O96014 354 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 SSFA2P28290 1259 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 ATP11AP98196 1134 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 CLEC10AQ8IUN9 316 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 FAM20CQ8IXL6 584 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 FOXD4L4Q8WXT5 416 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-208ENST00000521037 COL26A1Q96A83 441 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 CEP41Q9BYV8 373 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 VRTNQ9H8Y1 702 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 CD163L1Q9NR16 1453 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 VCANP13611 3396 aa5.68□□□□□ -1.5
VPS13B-208ENST00000521037 CENPFP49454 3210 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 FSCN2O14926 492 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 KIF4AO95239 1232 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 FXR1P51114 621 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS13B-208ENST00000521037 DDR1Q08345 913 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 FKBP5Q13451 457 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-208ENST00000521037 TXNDC11Q6PKC3 985 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 NFXL1Q6ZNB6 911 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 ACAD11Q709F0 780 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 ANKRD24Q8TF21 1146 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 UTP4Q969X6 686 aaKnown RBP5.67□□□□□ -1.5
VPS13B-208ENST00000521037 MPHOSPH9Q99550 1183 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 SAP130Q9H0E3 1048 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 RBSNQ9H1K0 784 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 NLRP2Q9NX02 1062 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 USP47Q96K76 1375 aa5.67□□□□□ -1.5
VPS13B-208ENST00000521037 DDX3YO15523 660 aaKnown RBP5.66□□□□□ -1.5
VPS13B-208ENST00000521037 GYS1P13807 737 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 CDC27P30260 824 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 CHRNA5P30532 468 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-208ENST00000521037 GRIK1P39086 918 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 HABP4Q5JVS0 413 aaKnown RBP5.66□□□□□ -1.5
VPS13B-208ENST00000521037 KLHL23Q8NBE8 558 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 KCNH5Q8NCM2 988 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 SHKBP1Q8TBC3 707 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 CLUAP1Q96AJ1 413 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 SYTL4Q96C24 671 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-208ENST00000521037 KLHDC7BQ96G42 594 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 ADAM19Q9H013 955 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 WDR33Q9C0J8 1336 aaKnown RBP5.66□□□□□ -1.5
VPS13B-208ENST00000521037 KDRP35968 1356 aa5.66□□□□□ -1.5
VPS13B-208ENST00000521037 TNFRSF10BO14763 440 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 EPHA1P21709 976 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 FMR1Q06787 632 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS13B-208ENST00000521037 OCLNQ16625 522 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 DUOXA2Q1HG44 320 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 CEP135Q66GS9 1140 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-208ENST00000521037 CEP120Q8N960 986 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 TRAIPQ9BWF2 469 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 LACRTQ9GZZ8 138 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.5
VPS13B-208ENST00000521037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS13B-208ENST00000521037 SBNO2Q9Y2G9 1366 aa5.65□□□□□ -1.51
VPS13B-208ENST00000521037 LTN1O94822 1766 aa5.65□□□□□ -1.51
VPS13B-208ENST00000521037 RGPD2P0DJD1 1756 aa5.65□□□□□ -1.51
VPS13B-208ENST00000521037 LAMA3Q16787 3333 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 TMEM88BA6NKF7 163 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 CYP27B1O15528 508 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 LMOD1P29536 600 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-208ENST00000521037 PREPP48147 710 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 SOX10P56693 466 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 COL19A1Q14993 1142 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 CBLL1Q75N03 491 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 PIGBQ92521 554 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 VTI1AQ96AJ9 217 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 POP1Q99575 1024 aaKnown RBP5.64□□□□□ -1.51
VPS13B-208ENST00000521037 SH2B1Q9NRF2 756 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-208ENST00000521037 PIM2Q9P1W9 311 aa5.64□□□□□ -1.51
VPS13B-208ENST00000521037 NRXN2Q9P2S2 1712 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 BMP3P12645 472 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 LMNB1P20700 586 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 JAG1P78504 1218 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 HYAL2Q12891 473 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 DALRD3Q5D0E6 543 aaKnown RBP5.63□□□□□ -1.51
VPS13B-208ENST00000521037 BEND4Q6ZU67 534 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 ABI1Q8IZP0 508 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 ZCRB1Q8TBF4 217 aaKnown RBP5.63□□□□□ -1.51
VPS13B-208ENST00000521037 UBASH3BQ8TF42 649 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 PBX4Q9BYU1 374 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-208ENST00000521037 MUC3AQ02505 3323 aa5.63□□□□□ -1.51
VPS13B-208ENST00000521037 MON2Q7Z3U7 1717 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 DLEC1Q9Y238 1755 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 ITGB4P16144 1822 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 CUL9Q8IWT3 2517 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 SMNDC1O75940 238 aaKnown RBP eCLIP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms