RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 USP17L19D6RCP7 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L20D6RJB6 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 CYP2D6P10635 497 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 EVX2Q03828 476 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L24Q0WX57 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 UBE3CQ15386 1083 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 AMOTL1Q8IY63 956 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 ACER1Q8TDN7 264 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 DDRGK1Q96HY6 314 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 ATP8A2Q9NTI2 1148 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 ECHDC1Q9NTX5 307 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 DOCK3Q8IZD9 2030 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 PRKAB2O43741 272 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 PEX10O60683 326 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 HMGCRP04035 888 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 VCAM1P19320 739 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 ERVK-24P63145 666 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 SEPT2Q15019 361 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 CWC22Q9HCG8 908 aaKnown RBP19.07■□□□□ 0.64
CLN8-205ENST00000520991 RBPJLQ9UBG7 517 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 SWAP70Q9UH65 585 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 GJD2Q9UKL4 321 aa19.07■□□□□ 0.64
CLN8-205ENST00000520991 MYH7P12883 1935 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 SGPL1O95470 568 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 CHGBP05060 677 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 MAPK4P31152 587 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 SLC44A5Q8NCS7 719 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 SOCS4Q8WXH5 440 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 DEFB118Q96PH6 123 aa19.06■□□□□ 0.64
CLN8-205ENST00000520991 FARP2O94887 1054 aaPredicted RBP19.05■□□□□ 0.64
CLN8-205ENST00000520991 TFRCP02786 760 aaKnown RBP19.05■□□□□ 0.64
CLN8-205ENST00000520991 GUCY1A2P33402 732 aa19.05■□□□□ 0.64
CLN8-205ENST00000520991 DYNLL2Q96FJ2 89 aa19.05■□□□□ 0.64
CLN8-205ENST00000520991 NUDT12Q9BQG2 462 aa19.05■□□□□ 0.64
CLN8-205ENST00000520991 RABGAP1Q9Y3P9 1069 aa19.05■□□□□ 0.64
CLN8-205ENST00000520991 SLC4A4Q9Y6R1 1079 aa19.05■□□□□ 0.64
CLN8-205ENST00000520991 CYP2B6P20813 491 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 Q3C1V9 767 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 CATSPERGQ6ZRH7 1159 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 TMEM179Q6ZVK1 233 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 DPF3Q92784 378 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 HTATIP2Q9BUP3 242 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.04■□□□□ 0.64
CLN8-205ENST00000520991 PORCNQ9H237 461 aa19.04■□□□□ 0.64
CLN8-205ENST00000520991 RPAP3Q9H6T3 665 aaPredicted RBP19.04■□□□□ 0.64
CLN8-205ENST00000520991 PAK6Q9NQU5 681 aaPredicted RBP19.04■□□□□ 0.64
CLN8-205ENST00000520991 CAPN2P17655 700 aa19.03■□□□□ 0.64
CLN8-205ENST00000520991 CCNA1P78396 465 aa19.03■□□□□ 0.64
CLN8-205ENST00000520991 TSHZ3Q63HK5 1081 aa19.03■□□□□ 0.64
CLN8-205ENST00000520991 GPR142Q7Z601 462 aa19.03■□□□□ 0.64
CLN8-205ENST00000520991 PLEKHH3Q7Z736 793 aa19.03■□□□□ 0.64
CLN8-205ENST00000520991 PUS7LQ9H0K6 701 aaKnown RBP19.03■□□□□ 0.64
CLN8-205ENST00000520991 BAZ2AQ9UIF9 1905 aaKnown RBP19.03■□□□□ 0.64
CLN8-205ENST00000520991 PLXNB2O15031 1838 aa19.03■□□□□ 0.64
CLN8-205ENST00000520991 MYH8P13535 1937 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 CYP2D7A0A087X1C5 515 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 USP17L12C9JPN9 530 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 USP17L21D6R901 530 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 C12orf60Q5U649 245 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 WDR78Q5VTH9 848 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 UBE2Q1Q7Z7E8 422 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 KBTBD3Q8NAB2 608 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 TRIB2Q92519 343 aa19.02■□□□□ 0.64
CLN8-205ENST00000520991 A0A1W2PRG0 241 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 XRCC5P13010 732 aaKnown RBP19.01■□□□□ 0.63
CLN8-205ENST00000520991 RGS2P41220 211 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 CDK8P49336 464 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 RRP1P56182 461 aaKnown RBP19.01■□□□□ 0.63
CLN8-205ENST00000520991 ICA1Q05084 483 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 TRIM32Q13049 653 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 POTEEQ6S8J3 1075 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 CCDC17Q96LX7 622 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 TANGO6Q9C0B7 1094 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 SH2D4AQ9H788 454 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 ARHGEF10LQ9HCE6 1279 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 HMX1Q9NP08 348 aaPredicted RBP19.01■□□□□ 0.63
CLN8-205ENST00000520991 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 RPTORQ8N122 1335 aa19.01■□□□□ 0.63
CLN8-205ENST00000520991 H0YGN5 161 aa19■□□□□ 0.63
CLN8-205ENST00000520991 CNMDO75829 334 aa19■□□□□ 0.63
CLN8-205ENST00000520991 GLRX3O76003 335 aaKnown RBP19■□□□□ 0.63
CLN8-205ENST00000520991 AKR1B1P15121 316 aa19■□□□□ 0.63
CLN8-205ENST00000520991 ZKSCAN1P17029 563 aaPredicted RBP19■□□□□ 0.63
CLN8-205ENST00000520991 LBX2Q6XYB7 198 aa19■□□□□ 0.63
CLN8-205ENST00000520991 C16orf86Q6ZW13 317 aa19■□□□□ 0.63
CLN8-205ENST00000520991 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
CLN8-205ENST00000520991 CRISPLD2Q9H0B8 497 aa19■□□□□ 0.63
CLN8-205ENST00000520991 SPDYE16A6NNV3 312 aaPredicted RBP19■□□□□ 0.63
CLN8-205ENST00000520991 HABP4Q5JVS0 413 aaKnown RBP19■□□□□ 0.63
CLN8-205ENST00000520991 MORN1Q5T089 497 aa19■□□□□ 0.63
CLN8-205ENST00000520991 CLEC10AQ8IUN9 316 aa19■□□□□ 0.63
CLN8-205ENST00000520991 APBA2Q99767 749 aa19■□□□□ 0.63
CLN8-205ENST00000520991 ARPP21Q9UBL0 812 aaPredicted RBP19■□□□□ 0.63
CLN8-205ENST00000520991 SMIM22K7EJ46 135 aa18.99■□□□□ 0.63
CLN8-205ENST00000520991 RNF113AO15541 343 aaKnown RBP18.99■□□□□ 0.63
CLN8-205ENST00000520991 ZFYP08048 801 aaPredicted RBP18.99■□□□□ 0.63
CLN8-205ENST00000520991 PRKAR2AP13861 404 aaKnown RBP18.99■□□□□ 0.63
CLN8-205ENST00000520991 COG2Q14746 738 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms