RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 HERC5Q9UII4 1024 aaKnown RBP21.69■■□□□ 1.06
VEGFA-222ENST00000520948 GABRQQ9UN88 632 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 FAM196BA6NMK8 535 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 USP17L12C9JPN9 530 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 USP17L21D6R901 530 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 C12orf60Q5U649 245 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 VPS53Q5VIR6 699 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 DNAJC18Q9H819 358 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 GTF3C3Q9Y5Q9 886 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 ATAD5Q96QE3 1844 aa21.68■■□□□ 1.06
VEGFA-222ENST00000520948 POLR3DP05423 398 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-222ENST00000520948 HLA-DOAP06340 250 aa21.67■■□□□ 1.06
VEGFA-222ENST00000520948 EVX2Q03828 476 aa21.67■■□□□ 1.06
VEGFA-222ENST00000520948 GABPAQ06546 454 aa21.67■■□□□ 1.06
VEGFA-222ENST00000520948 ALX1Q15699 326 aa21.67■■□□□ 1.06
VEGFA-222ENST00000520948 RNF208Q9H0X6 261 aa21.67■■□□□ 1.06
VEGFA-222ENST00000520948 CTNND1O60716 968 aaKnown RBP21.66■■□□□ 1.06
VEGFA-222ENST00000520948 CYP2D6P10635 497 aa21.66■■□□□ 1.06
VEGFA-222ENST00000520948 HSPD1P10809 573 aaKnown RBP21.66■■□□□ 1.06
VEGFA-222ENST00000520948 MFAP1P55081 439 aaKnown RBP21.66■■□□□ 1.06
VEGFA-222ENST00000520948 SMCR8Q8TEV9 937 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-222ENST00000520948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.66■■□□□ 1.063e-7■■■■■ 34.2
VEGFA-222ENST00000520948 RAD50Q92878 1312 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 SMIM22K7EJ46 135 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 SGSM2O43147 1006 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 APPP05067 770 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 GJB1P08034 283 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 GJA8P48165 433 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 UBXN2AP68543 259 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 RUFY2Q8WXA3 655 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 DPF3Q92784 378 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 ARPP21Q9UBL0 812 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-222ENST00000520948 SERPINB13Q9UIV8 391 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 TAOK2Q9UL54 1235 aa21.65■■□□□ 1.06
VEGFA-222ENST00000520948 CYP2D7A0A087X1C5 515 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 ELNP15502 786 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 RRP1BQ14684 758 aaKnown RBP21.64■■□□□ 1.05
VEGFA-222ENST00000520948 TATDN1Q6P1N9 297 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 SLAIN1Q8ND83 568 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 NKX2-3Q8TAU0 364 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 NACAP1Q9BZK3 213 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 UNC93B1Q9H1C4 597 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 SLC45A1Q9Y2W3 748 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 LOC285556D6RIA3 1793 aa21.64■■□□□ 1.05
VEGFA-222ENST00000520948 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
VEGFA-222ENST00000520948 TNPO2O14787 897 aaKnown RBP21.63■■□□□ 1.05
VEGFA-222ENST00000520948 ADCY3O60266 1144 aa21.63■■□□□ 1.05
VEGFA-222ENST00000520948 FGAP02671 866 aa21.63■■□□□ 1.05
VEGFA-222ENST00000520948 FLT3LGP49771 235 aa21.63■■□□□ 1.05
VEGFA-222ENST00000520948 TREML2Q5T2D2 321 aa21.63■■□□□ 1.05
VEGFA-222ENST00000520948 CEP290O15078 2479 aa21.62■■□□□ 1.05
VEGFA-222ENST00000520948 CHRDL2Q6WN34 429 aa21.62■■□□□ 1.05
VEGFA-222ENST00000520948 CRACR2BQ8N4Y2 399 aaPredicted RBP21.62■■□□□ 1.05
VEGFA-222ENST00000520948 ANKRD13CQ8N6S4 541 aa21.62■■□□□ 1.05
VEGFA-222ENST00000520948 U2AF1L4Q8WU68 220 aaKnown RBP21.62■■□□□ 1.05
VEGFA-222ENST00000520948 DSCC1Q9BVC3 393 aa21.62■■□□□ 1.05
VEGFA-222ENST00000520948 AGTPBP1Q9UPW5 1226 aa21.62■■□□□ 1.05
VEGFA-222ENST00000520948 CDC45O75419 566 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 SHMT1P34896 483 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 CAP2P40123 477 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 TDO2P48775 406 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 C16orf86Q6ZW13 317 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 UBE2Q1Q7Z7E8 422 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 DYNLL2Q96FJ2 89 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 NAPBQ9H115 298 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 ROBO3Q96MS0 1386 aa21.61■■□□□ 1.05
VEGFA-222ENST00000520948 DOCK3Q8IZD9 2030 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 INHAP05111 366 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 JAG1P78504 1218 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 SPP2Q13103 211 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 AMOTL1Q8IY63 956 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 ESYT1Q9BSJ8 1104 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 SWAP70Q9UH65 585 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 ANAPC4Q9UJX5 808 aa21.6■■□□□ 1.05
VEGFA-222ENST00000520948 MINDY4BA8MYZ0 360 aa21.59■■□□□ 1.05
VEGFA-222ENST00000520948 FARP2O94887 1054 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-222ENST00000520948 CDK8P49336 464 aa21.59■■□□□ 1.05
VEGFA-222ENST00000520948 PTH1RQ03431 593 aa21.58■■□□□ 1.05
VEGFA-222ENST00000520948 PPARAQ07869 468 aa21.58■■□□□ 1.05
VEGFA-222ENST00000520948 SLC44A5Q8NCS7 719 aa21.58■■□□□ 1.05
VEGFA-222ENST00000520948 HTATIP2Q9BUP3 242 aa21.58■■□□□ 1.05
VEGFA-222ENST00000520948 TRIM34Q9BYJ4 488 aa21.58■■□□□ 1.05
VEGFA-222ENST00000520948 PNMA3Q9UL41 463 aa21.58■■□□□ 1.05
VEGFA-222ENST00000520948 TRIOBPQ9H2D6 2365 aa21.58■■□□□ 1.04
VEGFA-222ENST00000520948 SGPL1O95470 568 aa21.57■■□□□ 1.04
VEGFA-222ENST00000520948 HMGCS2P54868 508 aa21.57■■□□□ 1.04
VEGFA-222ENST00000520948 ZNF280CQ8ND82 737 aa21.57■■□□□ 1.04
VEGFA-222ENST00000520948 GINM1Q9NU53 330 aa21.57■■□□□ 1.04
VEGFA-222ENST00000520948 RBM27Q9P2N5 1060 aaKnown RBP21.57■■□□□ 1.04
VEGFA-222ENST00000520948 TACC3Q9Y6A5 838 aa21.57■■□□□ 1.04
VEGFA-222ENST00000520948 FGRP09769 529 aa21.56■■□□□ 1.04
VEGFA-222ENST00000520948 IRF5Q13568 498 aa21.56■■□□□ 1.04
VEGFA-222ENST00000520948 CERKLQ49MI3 558 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-222ENST00000520948 PROCA1Q8NCQ7 364 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-222ENST00000520948 PXYLP1Q8TE99 480 aa21.56■■□□□ 1.04
VEGFA-222ENST00000520948 MAP4K1Q92918 833 aa21.56■■□□□ 1.04
VEGFA-222ENST00000520948 COA7Q96BR5 231 aa21.56■■□□□ 1.04
VEGFA-222ENST00000520948 DEFB118Q96PH6 123 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms