RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 MAP2K7O14733 419 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 TNFRSF21O75509 655 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 ARAFP10398 606 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 NFKB1P19838 968 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 SCP2P22307 547 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 CHMLP26374 656 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 SRSF11Q05519 484 aaKnown RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 ERCC6LQ2NKX8 1250 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 INTS3Q68E01 1043 aaKnown RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 NAIF1Q69YI7 327 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 RCSD1Q6JBY9 416 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 TREML4Q6UXN2 200 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 USP48Q86UV5 1035 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 DRAXINQ8NBI3 349 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 SPC24Q8NBT2 197 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 BHMTQ93088 406 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 IL17RAQ96F46 866 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 BAG1Q99933 345 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 USP26Q9BXU7 913 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 PDRG1Q9NUG6 133 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 CHCHD3Q9NX63 227 aaKnown RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 ABI2Q9NYB9 513 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 DNMT1P26358 1616 aaKnown RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 LAMC3Q9Y6N6 1575 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 ASXL1Q8IXJ9 1541 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 GRIN2BQ13224 1484 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 TRPM1Q7Z4N2 1603 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 CCDC151A5D8V7 595 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 SIN3BO75182 1162 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 RTN2O75298 545 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 MYBL2P10244 700 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 RARAP10276 462 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 RLBP1P12271 317 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 TMF1P82094 1093 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 TBC1D8BQ0IIM8 1120 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 PKP1Q13835 747 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 LRRFIP1Q32MZ4 808 aaKnown RBP9.9□□□□□ -0.82
SHPRH-208ENST00000520752 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 ANKRD45Q5TZF3 282 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 KRT25Q7Z3Z0 450 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 BRAPQ7Z569 592 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 SYT9Q86SS6 491 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 NPAS4Q8IUM7 802 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 LRRC8AQ8IWT6 810 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 AMOTL1Q8IY63 956 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 RPUSD2Q8IZ73 545 aaKnown RBP9.9□□□□□ -0.82
SHPRH-208ENST00000520752 PRPF38AQ8NAV1 312 aaKnown RBP9.9□□□□□ -0.82
SHPRH-208ENST00000520752 FAM71BQ8TC56 605 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 ZNF483Q8TF39 744 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-208ENST00000520752 TMX3Q96JJ7 454 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 IMPACTQ9P2X3 320 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 DNAI1Q9UI46 699 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 SMC3Q9UQE7 1217 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 EXOC6BQ9Y2D4 811 aa9.9□□□□□ -0.82
SHPRH-208ENST00000520752 ERBINQ96RT1 1412 aa9.9□□□□□ -0.83
SHPRH-208ENST00000520752 RPAP1Q9BWH6 1393 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 APAF1O14727 1248 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 AP5Z1O43299 807 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 EPB41L2O43491 1005 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 MMP20O60882 483 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 TADA3O75528 432 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 IMPDH2P12268 514 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 PECAM1P16284 738 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 PAX7P23759 505 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 RPS6KA3P51812 740 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 FMR1Q06787 632 aaKnown RBP eCLIP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 SNW1Q13573 536 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 PDIA5Q14554 519 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 ZRSR2Q15696 482 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 FILIP1LQ4L180 1135 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 HSP90AB4PQ58FF6 505 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 C1QTNF12Q5T7M4 302 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 LCE2AQ5TA79 106 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 RINLQ6ZS11 566 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 HDXQ7Z353 690 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 RAB44Q7Z6P3 723 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 RBM12BQ8IXT5 1001 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 SNX29Q8TEQ0 813 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 RABGGTAQ92696 567 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 PMEPA1Q969W9 287 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 GBP3Q9H0R5 595 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 TLR7Q9NYK1 1049 aaKnown RBP9.89□□□□□ -0.83
SHPRH-208ENST00000520752 KLF15Q9UIH9 416 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 CFTRP13569 1480 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 NUP160Q12769 1436 aa9.89□□□□□ -0.83
SHPRH-208ENST00000520752 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
SHPRH-208ENST00000520752 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
SHPRH-208ENST00000520752 HOXD8P13378 290 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-208ENST00000520752 SOX18P35713 384 aa9.88□□□□□ -0.83
SHPRH-208ENST00000520752 SCRN1Q12765 414 aa9.88□□□□□ -0.83
SHPRH-208ENST00000520752 CDC37Q16543 378 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-208ENST00000520752 SDCCAG8Q86SQ7 713 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-208ENST00000520752 OR13H1Q8NG92 308 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms