RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 USP17L19D6RCP7 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L20D6RJB6 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 GJA8P48165 433 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 EVX2Q03828 476 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L24Q0WX57 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 TSHZ3Q63HK5 1081 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 SLC44A5Q8NCS7 719 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 GTF3C2Q8WUA4 911 aaPredicted RBP19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 DYNLL2Q96FJ2 89 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 DEFB118Q96PH6 123 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 MORF4L1Q9UBU8 362 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 DDX60LQ5H9U9 1706 aaKnown RBP19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 FARP2O94887 1054 aaPredicted RBP19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 CHGBP05060 677 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 ERVK-9P63128 1117 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 ERVK-24P63145 666 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 NUDT12Q9BQG2 462 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 TANGO6Q9C0B7 1094 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 TXNRD2Q9NNW7 524 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 HTTP42858 3142 aa19.43■□□□□ 0.7
IGHV3-42-201ENST00000520410 RAD21O60216 631 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 HMGCRP04035 888 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 VCAM1P19320 739 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 MAPK4P31152 587 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 ATP2B2Q01814 1243 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 STK11IPQ8N1F8 1099 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 HTATIP2Q9BUP3 242 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 ATP8A2Q9NTI2 1148 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 SWAP70Q9UH65 585 aa19.42■□□□□ 0.7
IGHV3-42-201ENST00000520410 CYP2D7A0A087X1C5 515 aa19.41■□□□□ 0.7
IGHV3-42-201ENST00000520410 CCNA1P78396 465 aa19.41■□□□□ 0.7
IGHV3-42-201ENST00000520410 UBE3CQ15386 1083 aa19.41■□□□□ 0.7
IGHV3-42-201ENST00000520410 SOCS4Q8WXH5 440 aa19.41■□□□□ 0.7
IGHV3-42-201ENST00000520410 KIAA1683Q9H0B3 1180 aa19.41■□□□□ 0.7
IGHV3-42-201ENST00000520410 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.41■□□□□ 0.7
IGHV3-42-201ENST00000520410 PDE4DIPQ5VU43 2346 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 SLC34A2O95436 690 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 SGPL1O95470 568 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 RRP1P56182 461 aaKnown RBP19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 TMEM179Q6ZVK1 233 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 C12orf42Q96LP6 360 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 ARHGEF10LQ9HCE6 1279 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 RBPJLQ9UBG7 517 aa19.4■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L12C9JPN9 530 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 USP17L21D6R901 530 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 ZKSCAN1P17029 563 aaPredicted RBP19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 ICA1Q05084 483 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 GABPAQ06546 454 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 Q3C1V9 767 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 GPR142Q7Z601 462 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 PLEKHH3Q7Z736 793 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 CLEC10AQ8IUN9 316 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 PUS7LQ9H0K6 701 aaKnown RBP19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 PORCNQ9H237 461 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 DCTPP1Q9H773 170 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 HMX1Q9NP08 348 aaPredicted RBP19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 IVNS1ABPQ9Y6Y0 642 aa19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 KIAA0100Q14667 2235 aaKnown RBP19.39■□□□□ 0.69
IGHV3-42-201ENST00000520410 GLRX3O76003 335 aaKnown RBP19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 AKR1B1P15121 316 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 RGS2P41220 211 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 TRIM32Q13049 653 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 CATSPERGQ6ZRH7 1159 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 TRIB2Q92519 343 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 SH2D4AQ9H788 454 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 RABGAP1Q9Y3P9 1069 aa19.38■□□□□ 0.69
IGHV3-42-201ENST00000520410 APPP05067 770 aa19.37■□□□□ 0.69
IGHV3-42-201ENST00000520410 CDK8P49336 464 aa19.37■□□□□ 0.69
IGHV3-42-201ENST00000520410 SPICE1Q8N0Z3 855 aa19.37■□□□□ 0.69
IGHV3-42-201ENST00000520410 ARPP21Q9UBL0 812 aaPredicted RBP19.37■□□□□ 0.69
IGHV3-42-201ENST00000520410 GJD2Q9UKL4 321 aa19.37■□□□□ 0.69
IGHV3-42-201ENST00000520410 MYH7P12883 1935 aa19.37■□□□□ 0.69
IGHV3-42-201ENST00000520410 MINDY4BA8MYZ0 360 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 H0YGN5 161 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 ERC2O15083 957 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 PRKAR2AP13861 404 aaKnown RBP19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 TDO2P48775 406 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 PLS1Q14651 629 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 C12orf60Q5U649 245 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 KBTBD3Q8NAB2 608 aa19.36■□□□□ 0.69
IGHV3-42-201ENST00000520410 MYH8P13535 1937 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 BAZ2AQ9UIF9 1905 aaKnown RBP19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 RPTORQ8N122 1335 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 A0A1W2PRG0 241 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 SPDYE16A6NNV3 312 aaPredicted RBP19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 SMIM22K7EJ46 135 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 APPBP2Q92624 585 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 APBA2Q99767 749 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 PAK6Q9NQU5 681 aaPredicted RBP19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
IGHV3-42-201ENST00000520410 RNF113AO15541 343 aaKnown RBP19.34■□□□□ 0.69
IGHV3-42-201ENST00000520410 FLOT1O75955 427 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms