RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ABI2Q9NYB9 513 aaPredicted RBP5.61□□□□□ -1.51
PABPC1-212ENST00000519622 CNTN3Q9P232 1028 aa5.61□□□□□ -1.51
PABPC1-212ENST00000519622 IBTKQ9P2D0 1353 aaPredicted RBP5.61□□□□□ -1.51
PABPC1-212ENST00000519622 KANSL3Q9P2N6 904 aa5.61□□□□□ -1.51
PABPC1-212ENST00000519622 TSPYL4Q9UJ04 414 aa5.61□□□□□ -1.51
PABPC1-212ENST00000519622 SLC6A14Q9UN76 642 aa5.61□□□□□ -1.51
PABPC1-212ENST00000519622 ARFGEF2Q9Y6D5 1785 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 NHSL1Q5SYE7 1610 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 PLEKHG2Q9H7P9 1386 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 PNMA6EA0A0J9YXQ4 647 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 ZBTB42B2RXF5 422 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 SMARCA5O60264 1052 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 MAP3K6O95382 1288 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 IGHA2P01877 340 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 TRIM28Q13263 835 aaKnown RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 PRRT3Q5FWE3 981 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 NKAPLQ5M9Q1 402 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 COL13A1Q5TAT6 717 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 ANKRD45Q5TZF3 282 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 HFE2Q6ZVN8 426 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 ILDR2Q71H61 639 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 LRP10Q7Z4F1 713 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 RPAP2Q8IXW5 612 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 C1orf127Q8N9H9 656 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 NSUN5Q96P11 429 aaKnown RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 RBCK1Q9BYM8 510 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 CHRDQ9H2X0 955 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 EFCC1Q9HA90 598 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 TLR7Q9NYK1 1049 aaKnown RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 NAGPAQ9UK23 515 aa5.6□□□□□ -1.51
PABPC1-212ENST00000519622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-212ENST00000519622 KCPQ6ZWJ8 1503 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 TNS3Q68CZ2 1445 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 TMEM94Q12767 1356 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 SPDYE3A6NKU9 549 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 LILRB5O75023 590 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 TNFRSF21O75509 655 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 GCP02774 474 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 PSAPP07602 524 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 CPB1P15086 417 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 SELPP16109 830 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 SDSP20132 328 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 CCT4P50991 539 aaKnown RBP5.59□□□□□ -1.51
PABPC1-212ENST00000519622 EHHADHQ08426 723 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 ORC1Q13415 861 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 TAF7Q15545 349 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-212ENST00000519622 TRAPPC3LQ5T215 181 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 TTC39BQ5VTQ0 682 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-212ENST00000519622 XKR5Q6UX68 686 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 OR13H1Q8NG92 308 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 SNX29Q8TEQ0 813 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 USP44Q9H0E7 712 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 IL25Q9H293 177 aa5.59□□□□□ -1.51
PABPC1-212ENST00000519622 PHAXQ9H814 394 aaKnown RBP5.59□□□□□ -1.51
PABPC1-212ENST00000519622 AK9Q5TCS8 1911 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 CPDO75976 1380 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 WNK3Q9BYP7 1800 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 USP42Q9H9J4 1324 aaKnown RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 A0A0A0MRY4 1105 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 EREGO14944 169 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 RNMTO43148 476 aaKnown RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 PHACTR2O75167 634 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 CDC45O75419 566 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 APBA3O96018 575 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 HOXB7P09629 217 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 AFF1P51825 1210 aaKnown RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 GPLD1P80108 840 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 XPCQ01831 940 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 PLAURQ03405 335 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 PROSER3Q2NL68 480 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 FOXD4L6Q3SYB3 417 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 BEND3Q5T5X7 828 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 USPL1Q5W0Q7 1092 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 PSAPL1Q6NUJ1 521 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 SHISA2Q6UWI4 295 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 FOXD4L3Q6VB84 417 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 SSH3Q8TE77 659 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 LTV1Q96GA3 475 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 CITED4Q96RK1 184 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 SLKQ9H2G2 1235 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 CHMP4BQ9H444 224 aaKnown RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 JPH1Q9HDC5 661 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-212ENST00000519622 STAP2Q9UGK3 403 aa5.58□□□□□ -1.52
PABPC1-212ENST00000519622 PLCH1Q4KWH8 1693 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 FSD2A1L4K1 749 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 PRAMEF22A3QJZ6 481 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 J3QW42 95 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 POLR3DP05423 398 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-212ENST00000519622 ACPPP15309 386 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 EIF2AK2P19525 551 aaKnown RBP5.57□□□□□ -1.52
PABPC1-212ENST00000519622 SOX18P35713 384 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 PDE1AP54750 535 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 NRLP54845 237 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 MTX1Q13505 466 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 AKAP4Q5JQC9 854 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 FAM35AQ86V20 835 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 UNC5CLQ8IV45 518 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 KCNH5Q8NCM2 988 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms