RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 MAP3K12Q12852 859 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 TTC6Q86TZ1 520 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 FEZ1Q99689 392 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 APBA2Q99767 749 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 FOCADQ5VW36 1801 aa23.45■■□□□ 1.34
CHMP7-204ENST00000519414 CCNA1P78396 465 aa23.45■■□□□ 1.34
CHMP7-204ENST00000519414 CCL14Q16627 93 aa23.45■■□□□ 1.34
CHMP7-204ENST00000519414 KIAA1683Q9H0B3 1180 aa23.45■■□□□ 1.34
CHMP7-204ENST00000519414 CWC22Q9HCG8 908 aaKnown RBP23.45■■□□□ 1.34
CHMP7-204ENST00000519414 PFASO15067 1338 aa23.44■■□□□ 1.34
CHMP7-204ENST00000519414 GLRX3O76003 335 aaKnown RBP23.44■■□□□ 1.34
CHMP7-204ENST00000519414 RAB3GAP1Q15042 981 aa23.44■■□□□ 1.34
CHMP7-204ENST00000519414 ZYXQ15942 572 aaKnown RBP23.44■■□□□ 1.34
CHMP7-204ENST00000519414 CERKLQ49MI3 558 aaPredicted RBP23.44■■□□□ 1.34
CHMP7-204ENST00000519414 LHX8Q68G74 356 aa23.44■■□□□ 1.34
CHMP7-204ENST00000519414 CATSPERGQ6ZRH7 1159 aa23.44■■□□□ 1.34
CHMP7-204ENST00000519414 ANTXR1Q9H6X2 564 aa23.44■■□□□ 1.34
CHMP7-204ENST00000519414 NDUFB9Q9Y6M9 179 aa23.44■■□□□ 1.34
CHMP7-204ENST00000519414 ALPK3Q96L96 1907 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 CDK5RAP2Q96SN8 1893 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 CNMDO75829 334 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 COL6A1P12109 1028 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 RLBP1P12271 317 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 SYN1P17600 705 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 CCND3P30281 292 aaPredicted RBP23.43■■□□□ 1.34
CHMP7-204ENST00000519414 MAP2K5Q13163 448 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 ABCB5Q2M3G0 1257 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 GPR153Q6NV75 609 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 CABP5Q9NP86 173 aa23.43■■□□□ 1.34
CHMP7-204ENST00000519414 MAGEA10P43363 369 aaPredicted RBP23.42■■□□□ 1.34
CHMP7-204ENST00000519414 CEP85Q6P2H3 762 aa23.42■■□□□ 1.34
CHMP7-204ENST00000519414 ERC1Q8IUD2 1116 aa23.42■■□□□ 1.34
CHMP7-204ENST00000519414 EDC3Q96F86 508 aaKnown RBP23.42■■□□□ 1.34
CHMP7-204ENST00000519414 DDX60LQ5H9U9 1706 aaKnown RBP23.42■■□□□ 1.34
CHMP7-204ENST00000519414 VCAM1P19320 739 aa23.41■■□□□ 1.34
CHMP7-204ENST00000519414 LBX2Q6XYB7 198 aa23.41■■□□□ 1.34
CHMP7-204ENST00000519414 AACSQ86V21 672 aa23.41■■□□□ 1.34
CHMP7-204ENST00000519414 RCAN3Q9UKA8 241 aa23.41■■□□□ 1.34
CHMP7-204ENST00000519414 SLC15A5A6NIM6 579 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 SHMT1P34896 483 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 PLCD1P51178 756 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 LRIT3Q3SXY7 679 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 MFSD14CQ5VZR4 134 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 SLC17A8Q8NDX2 589 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 ACER1Q8TDN7 264 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
CHMP7-204ENST00000519414 EXOC6BQ9Y2D4 811 aa23.4■■□□□ 1.34
CHMP7-204ENST00000519414 MYO5AQ9Y4I1 1855 aaKnown RBP23.39■■□□□ 1.34
CHMP7-204ENST00000519414 PTPREP23469 700 aa23.39■■□□□ 1.33
CHMP7-204ENST00000519414 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.33
CHMP7-204ENST00000519414 WDR78Q5VTH9 848 aa23.39■■□□□ 1.33
CHMP7-204ENST00000519414 TDHQ8IZJ6 230 aa23.39■■□□□ 1.33
CHMP7-204ENST00000519414 MAGEB6P1A0A0J9YX57 407 aa23.38■■□□□ 1.33
CHMP7-204ENST00000519414 POLR3DP05423 398 aaPredicted RBP23.38■■□□□ 1.33
CHMP7-204ENST00000519414 UBE2OQ9C0C9 1292 aaKnown RBP23.38■■□□□ 1.33
CHMP7-204ENST00000519414 BTBD7Q9P203 1132 aa23.38■■□□□ 1.33
CHMP7-204ENST00000519414 IVNS1ABPQ9Y6Y0 642 aa23.38■■□□□ 1.33
CHMP7-204ENST00000519414 HOXC6P09630 235 aa23.37■■□□□ 1.33
CHMP7-204ENST00000519414 GUCY1A2P33402 732 aa23.37■■□□□ 1.33
CHMP7-204ENST00000519414 GABPAQ06546 454 aa23.37■■□□□ 1.33
CHMP7-204ENST00000519414 LRRC26Q2I0M4 334 aa23.37■■□□□ 1.33
CHMP7-204ENST00000519414 HSP90AB4PQ58FF6 505 aa23.37■■□□□ 1.33
CHMP7-204ENST00000519414 RPAP3Q9H6T3 665 aaPredicted RBP23.37■■□□□ 1.33
CHMP7-204ENST00000519414 FLRT1Q9NZU1 646 aa23.37■■□□□ 1.33
CHMP7-204ENST00000519414 SPDYE16A6NNV3 312 aaPredicted RBP23.36■■□□□ 1.33
CHMP7-204ENST00000519414 ATP2B2Q01814 1243 aa23.36■■□□□ 1.33
CHMP7-204ENST00000519414 GRB14Q14449 540 aa23.36■■□□□ 1.33
CHMP7-204ENST00000519414 CRNKL1Q9BZJ0 848 aaKnown RBP23.36■■□□□ 1.33
CHMP7-204ENST00000519414 MYH1P12882 1939 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 MSCO60682 206 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 SEPT2Q15019 361 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 SLC9C2Q5TAH2 1124 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 DEFB123Q8N688 67 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 RHPN1Q8TCX5 695 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 MCM9Q9NXL9 1143 aa23.35■■□□□ 1.33
CHMP7-204ENST00000519414 LAMA3Q16787 3333 aa23.34■■□□□ 1.33
CHMP7-204ENST00000519414 PDE6AP16499 860 aa23.34■■□□□ 1.33
CHMP7-204ENST00000519414 IL1RAPL2Q9NP60 686 aa23.34■■□□□ 1.33
CHMP7-204ENST00000519414 HOXC10Q9NYD6 342 aa23.34■■□□□ 1.33
CHMP7-204ENST00000519414 DDX20Q9UHI6 824 aaKnown RBP23.34■■□□□ 1.33
CHMP7-204ENST00000519414 COG2Q14746 738 aa23.33■■□□□ 1.33
CHMP7-204ENST00000519414 NPLOC4Q8TAT6 608 aa23.33■■□□□ 1.33
CHMP7-204ENST00000519414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.33■■□□□ 1.33
CHMP7-204ENST00000519414 LPAR1Q92633 364 aa23.33■■□□□ 1.33
CHMP7-204ENST00000519414 A0A1W2PRG0 241 aa23.32■■□□□ 1.32
CHMP7-204ENST00000519414 MPHOSPH10O00566 681 aaKnown RBP23.32■■□□□ 1.32
CHMP7-204ENST00000519414 CNGA1P29973 690 aa23.32■■□□□ 1.32
CHMP7-204ENST00000519414 CLASRPQ8N2M8 674 aaKnown RBP23.32■■□□□ 1.32
CHMP7-204ENST00000519414 SENP6Q9GZR1 1112 aaPredicted RBP23.32■■□□□ 1.32
CHMP7-204ENST00000519414 ZNF532Q9HCE3 1301 aa23.32■■□□□ 1.32
CHMP7-204ENST00000519414 DLL1O00548 723 aa23.31■■□□□ 1.32
CHMP7-204ENST00000519414 STRNO43815 780 aa23.31■■□□□ 1.32
CHMP7-204ENST00000519414 IGHA2P01877 340 aa23.31■■□□□ 1.32
CHMP7-204ENST00000519414 CYP2C19P33261 490 aa23.31■■□□□ 1.32
CHMP7-204ENST00000519414 PANK1Q8TE04 598 aa23.31■■□□□ 1.32
CHMP7-204ENST00000519414 MOV10L1Q9BXT6 1211 aaKnown RBP23.31■■□□□ 1.32
CHMP7-204ENST00000519414 DCP1AQ9NPI6 582 aaPredicted RBP23.31■■□□□ 1.32
CHMP7-204ENST00000519414 GOLIM4O00461 696 aa23.3■■□□□ 1.32
CHMP7-204ENST00000519414 MDM2Q00987 491 aaPredicted RBP23.3■■□□□ 1.32
CHMP7-204ENST00000519414 EVX2Q03828 476 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms