RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 PASKQ96RG2 1323 aa8.5□□□□□ -1.05
MRPS28-205ENST00000519386 GPR75-ASB3A0A0A6YYF3 556 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 TCP10L2B9ZVM9 353 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 PFKFB2O60825 505 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 MBD4O95243 580 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 BAG4O95429 457 aaKnown RBP8.49□□□□□ -1.05
MRPS28-205ENST00000519386 LDHCP07864 332 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 CYP7A1P22680 504 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 HMGN5P82970 282 aaKnown RBP8.49□□□□□ -1.05
MRPS28-205ENST00000519386 TRDNQ13061 729 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 ME3Q16798 604 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 PRAMEF18Q5VWM3 479 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 ADGRA1Q86SQ6 560 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 KCNK17Q96T54 332 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 NAPBQ9H115 298 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 RNF41Q9H4P4 317 aaPredicted RBP8.49□□□□□ -1.05
MRPS28-205ENST00000519386 ANAPC4Q9UJX5 808 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 ISY1Q9ULR0 285 aaKnown RBP8.49□□□□□ -1.05
MRPS28-205ENST00000519386 TAF6LQ9Y6J9 622 aa8.49□□□□□ -1.05
MRPS28-205ENST00000519386 ROBO3Q96MS0 1386 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 SPDYE16A6NNV3 312 aaPredicted RBP8.48□□□□□ -1.05
MRPS28-205ENST00000519386 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 STX6O43752 255 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 DHX16O60231 1041 aaKnown RBP8.48□□□□□ -1.05
MRPS28-205ENST00000519386 LARGE1O95461 756 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 CPA1P15085 419 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 ST3GAL1Q11201 340 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 SLFNL1Q499Z3 407 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 Q6ZUG5 572 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 IFNL3Q8IZI9 196 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 STAG1Q8WVM7 1258 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
MRPS28-205ENST00000519386 NOL10Q9BSC4 688 aaKnown RBP8.48□□□□□ -1.05
MRPS28-205ENST00000519386 KRT23Q9C075 422 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 ZNF408Q9H9D4 720 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 EPB41L4AQ9HCS5 686 aaPredicted RBP8.48□□□□□ -1.05
MRPS28-205ENST00000519386 USP40Q9NVE5 1235 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 ZDHHC9Q9Y397 364 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 CNTNAP1P78357 1384 aa8.48□□□□□ -1.05
MRPS28-205ENST00000519386 TK2O00142 265 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 CELF2O95319 508 aaKnown RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 ZSCAN22P10073 491 aaPredicted RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 SYT1P21579 422 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 LIFRP42702 1097 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 APLP1P51693 650 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 RHBDL3P58872 404 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 FGD1P98174 961 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 NFIAQ12857 509 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 TNFAIP1Q13829 316 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 RASA3Q14644 834 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 KLHL40Q2TBA0 621 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 FKBP1CQ5VVH2 108 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 CST9Q5W186 159 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 NOL8Q76FK4 1167 aaKnown RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 SGMS1Q86VZ5 419 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 CCDC83Q8IWF9 413 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 LCORLQ8N3X6 602 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 MIGA1Q8NAN2 632 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 TMEM87AQ8NBN3 555 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 SMARCC2Q8TAQ2 1214 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 SH3RF3Q8TEJ3 882 aaPredicted RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 BRF1Q92994 677 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 NBPF3Q9H094 633 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 DEFB129Q9H1M3 183 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 DDX4Q9NQI0 724 aaKnown RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 ATP8A2Q9NTI2 1148 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 AATFQ9NY61 560 aaKnown RBP eCLIP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 ARPP21Q9UBL0 812 aaPredicted RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 FAM198AQ9UFP1 575 aa8.47□□□□□ -1.05
MRPS28-205ENST00000519386 ANGEL1Q9UNK9 670 aaKnown RBP8.47□□□□□ -1.05
MRPS28-205ENST00000519386 CEP350Q5VT06 3117 aa8.46□□□□□ -1.05
MRPS28-205ENST00000519386 PRC1O43663 620 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 WDHD1O75717 1129 aaPredicted RBP8.46□□□□□ -1.06
MRPS28-205ENST00000519386 BAG3O95817 575 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 MBD3O95983 291 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 F13A1P00488 732 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 APPP05067 770 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 FGRP09769 529 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 HSPA6P17066 643 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 PTPREP23469 700 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 GJB2P29033 226 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 TDO2P48775 406 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 TNNI2P48788 182 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 PPP4CP60510 307 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 HTRA3P83110 453 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 TCP10Q12799 353 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 PICALMQ13492 652 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 PKP1Q13835 747 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
MRPS28-205ENST00000519386 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 TYW1BQ6NUM6 668 aa8.46□□□□□ -1.06
MRPS28-205ENST00000519386 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 255.3 ms