RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 NOP58Q9Y2X3 529 aaKnown RBP10.69□□□□□ -0.7
TRIM35-202ENST00000519219 A0A0C4DFX4 3053 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 COL11A1P12107 1806 aaPredicted RBP10.69□□□□□ -0.7
TRIM35-202ENST00000519219 A0A0G2JMZ2 1700 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 SMCHD1A6NHR9 2005 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 HLA-DOAP06340 250 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 CAPN2P17655 700 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 SHMT1P34896 483 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 PLCD1P51178 756 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 PDE3AQ14432 1141 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 RAB3GAP1Q15042 981 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 TATDN1Q6P1N9 297 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 DEFB123Q8N688 67 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 APBA2Q99767 749 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 CUL9Q8IWT3 2517 aa10.68□□□□□ -0.7
TRIM35-202ENST00000519219 LAMA2P24043 3122 aaKnown RBP10.68□□□□□ -0.7
TRIM35-202ENST00000519219 DLL1O00548 723 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 VCAM1P19320 739 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 RGS2P41220 211 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 USP5P45974 858 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
TRIM35-202ENST00000519219 MAP2K5Q13163 448 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 KIAA1755Q5JYT7 1200 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
TRIM35-202ENST00000519219 CATSPERGQ6ZRH7 1159 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 ITPRIPQ8IWB1 547 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 TRPV1Q8NER1 839 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 C12orf42Q96LP6 360 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 FEZ1Q99689 392 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 RIOK1Q9BRS2 568 aaKnown RBP10.67□□□□□ -0.7
TRIM35-202ENST00000519219 UBE2OQ9C0C9 1292 aaKnown RBP10.67□□□□□ -0.7
TRIM35-202ENST00000519219 EXOC6BQ9Y2D4 811 aa10.67□□□□□ -0.7
TRIM35-202ENST00000519219 MYH7P12883 1935 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 ZNF236Q9UL36 1845 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 A0A1W2PRG0 241 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 SMIM22K7EJ46 135 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 CYP2D6P10635 497 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 SEPT2Q15019 361 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 ABCB5Q2M3G0 1257 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 SLFNL1Q499Z3 407 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 WDR78Q5VTH9 848 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 CEP85Q6P2H3 762 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 CCAR1Q8IX12 1150 aaKnown RBP10.66□□□□□ -0.7
TRIM35-202ENST00000519219 TDHQ8IZJ6 230 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 KIAA1683Q9H0B3 1180 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
TRIM35-202ENST00000519219 IL1RAPL2Q9NP60 686 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 GINM1Q9NU53 330 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 SERPINB13Q9UIV8 391 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 RABGAP1Q9Y3P9 1069 aa10.66□□□□□ -0.7
TRIM35-202ENST00000519219 PTPREP23469 700 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 CYP2C19P33261 490 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
TRIM35-202ENST00000519219 LRIT3Q3SXY7 679 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.7
TRIM35-202ENST00000519219 AACSQ86V21 672 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
TRIM35-202ENST00000519219 SLC44A5Q8NCS7 719 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
TRIM35-202ENST00000519219 EHD4Q9H223 541 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 PLXNA1Q9UIW2 1896 aa10.65□□□□□ -0.7
TRIM35-202ENST00000519219 SLC15A5A6NIM6 579 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 IGHA2P01877 340 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 CHGBP05060 677 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 GABPAQ06546 454 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 GRB14Q14449 540 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 ANO1Q5XXA6 986 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
TRIM35-202ENST00000519219 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 GTF3C2Q8WUA4 911 aaPredicted RBP10.64□□□□□ -0.71
TRIM35-202ENST00000519219 SDR42E1Q8WUS8 393 aa10.64□□□□□ -0.71
TRIM35-202ENST00000519219 SENP6Q9GZR1 1112 aaPredicted RBP10.64□□□□□ -0.71
TRIM35-202ENST00000519219 CWC22Q9HCG8 908 aaKnown RBP10.64□□□□□ -0.71
TRIM35-202ENST00000519219 DDX20Q9UHI6 824 aaKnown RBP10.64□□□□□ -0.71
TRIM35-202ENST00000519219 MAGEB6P1A0A0J9YX57 407 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 TCRBV5S4A2TA0A5A2 114 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 APBB1O00213 710 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 COBLO75128 1261 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 CYBAP13498 195 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 PDE6AP16499 860 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 CNGA1P29973 690 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 USP14P54578 494 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 MAP3K12Q12852 859 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 MFSD14CQ5VZR4 134 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 LBX2Q6XYB7 198 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms