RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 UNC93B1Q9H1C4 597 aa16.81■□□□□ 0.28
BRD9-217ENST00000519112 RLFQ13129 1914 aa16.8■□□□□ 0.28
BRD9-217ENST00000519112 A0A1W2PRG0 241 aa16.8■□□□□ 0.28
BRD9-217ENST00000519112 KIAA1683Q9H0B3 1180 aa16.8■□□□□ 0.28
BRD9-217ENST00000519112 RNF208Q9H0X6 261 aa16.8■□□□□ 0.28
BRD9-217ENST00000519112 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
BRD9-217ENST00000519112 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
BRD9-217ENST00000519112 BIN2Q9UBW5 565 aaPredicted RBP16.8■□□□□ 0.28
BRD9-217ENST00000519112 INHAP05111 366 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 GJB1P08034 283 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 VCAM1P19320 739 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 GJA8P48165 433 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 UBXN2AP68543 259 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 C12orf60Q5U649 245 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
BRD9-217ENST00000519112 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 FEZ1Q99689 392 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 TAOK2Q9UL54 1235 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 SLC4A4Q9Y6R1 1079 aa16.79■□□□□ 0.28
BRD9-217ENST00000519112 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 USP17L21D6R901 530 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 CNMDO75829 334 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 AKR1B1P15121 316 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 ERVK-9P63128 1117 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 ERVK-24P63145 666 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 ZSCAN25Q6NSZ9 544 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 GPRC5AQ8NFJ5 357 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 PORCNQ9H237 461 aa16.78■□□□□ 0.28
BRD9-217ENST00000519112 USP17L15C9J2P7 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L13C9JLJ4 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L11C9JVI0 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L18D6R9N7 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L22D6RA61 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L17D6RBQ6 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L19D6RCP7 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L20D6RJB6 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP14P54578 494 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 USP17L24Q0WX57 530 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 KIAA1755Q5JYT7 1200 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 UBE2Q1Q7Z7E8 422 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 CLEC10AQ8IUN9 316 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 PI4K2BQ8TCG2 481 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 OSBP2Q969R2 916 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
BRD9-217ENST00000519112 STRBPQ96SI9 672 aaKnown RBP16.77■□□□□ 0.28
BRD9-217ENST00000519112 PAGR1Q9BTK6 254 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 SWAP70Q9UH65 585 aa16.77■□□□□ 0.28
BRD9-217ENST00000519112 PARP14Q460N5 1801 aa16.77■□□□□ 0.27
BRD9-217ENST00000519112 SGPL1O95470 568 aa16.76■□□□□ 0.27
BRD9-217ENST00000519112 CDK8P49336 464 aa16.76■□□□□ 0.27
BRD9-217ENST00000519112 TRIM32Q13049 653 aa16.76■□□□□ 0.27
BRD9-217ENST00000519112 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
BRD9-217ENST00000519112 PAK6Q9NQU5 681 aaPredicted RBP16.76■□□□□ 0.27
BRD9-217ENST00000519112 GREB1LQ9C091 1923 aaPredicted RBP16.75■□□□□ 0.27
BRD9-217ENST00000519112 GSG1L2A8MUP6 293 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 TMEM179Q6ZVK1 233 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 NKX2-3Q8TAU0 364 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 TRIB2Q92519 343 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 GPATCH3Q96I76 525 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 RPAP3Q9H6T3 665 aaPredicted RBP16.75■□□□□ 0.27
BRD9-217ENST00000519112 BTBD7Q9P203 1132 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 CEP290O15078 2479 aa16.75■□□□□ 0.27
BRD9-217ENST00000519112 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 SALL3Q9BXA9 1300 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 A0A0G2JMZ2 1700 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 SPDYE16A6NNV3 312 aaPredicted RBP16.74■□□□□ 0.27
BRD9-217ENST00000519112 M0R2C6 588 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 RNF113AO15541 343 aaKnown RBP16.74■□□□□ 0.27
BRD9-217ENST00000519112 CYP2B6P20813 491 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 LBX2Q6XYB7 198 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 GPR142Q7Z601 462 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 GTF3C2Q8WUA4 911 aaPredicted RBP16.74■□□□□ 0.27
BRD9-217ENST00000519112 APPBP2Q92624 585 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 USP6NLQ92738 828 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 DEFB118Q96PH6 123 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 RABGAP1Q9Y3P9 1069 aa16.74■□□□□ 0.27
BRD9-217ENST00000519112 SLC34A2O95436 690 aa16.73■□□□□ 0.27
BRD9-217ENST00000519112 HMGCRP04035 888 aa16.73■□□□□ 0.27
BRD9-217ENST00000519112 MAPK4P31152 587 aa16.73■□□□□ 0.27
BRD9-217ENST00000519112 MORN1Q5T089 497 aa16.73■□□□□ 0.27
BRD9-217ENST00000519112 CRISPLD2Q9H0B8 497 aa16.73■□□□□ 0.27
BRD9-217ENST00000519112 EPB41L4AQ9HCS5 686 aaPredicted RBP16.73■□□□□ 0.27
BRD9-217ENST00000519112 SBK1Q52WX2 424 aa16.72■□□□□ 0.27
BRD9-217ENST00000519112 SEC62Q99442 399 aaKnown RBP16.72■□□□□ 0.27
BRD9-217ENST00000519112 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
BRD9-217ENST00000519112 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
BRD9-217ENST00000519112 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.72■□□□□ 0.27
BRD9-217ENST00000519112 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
BRD9-217ENST00000519112 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
BRD9-217ENST00000519112 COL11A1P12107 1806 aaPredicted RBP16.72■□□□□ 0.27
BRD9-217ENST00000519112 ALPK3Q96L96 1907 aa16.72■□□□□ 0.27
BRD9-217ENST00000519112 RANBP2P49792 3224 aaKnown RBP16.71■□□□□ 0.27
BRD9-217ENST00000519112 GPAA1O43292 621 aa16.71■□□□□ 0.27
BRD9-217ENST00000519112 ICA1Q05084 483 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms