RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TRAK2O60296 914 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 DTNBO60941 627 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 DEXIO95424 95 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 NOVP48745 357 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 ZNF280AP59817 542 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 KRT85P78386 507 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 TCP10Q12799 353 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 ATL3Q6DD88 541 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 FAM151AQ8WW52 585 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 ZBED3Q96IU2 234 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 ALG1Q9BT22 464 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 SLC26A6Q9BXS9 759 aa17.5■□□□□ 0.39
TRAPPC9-205ENST00000518839 LMNB1P20700 586 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 SHMT1P34896 483 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 CACNB3P54284 484 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 RESTQ13127 1097 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 TMTC3Q6ZXV5 915 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 FAM83AQ86UY5 434 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 LZTS2Q9BRK4 669 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 LMBRD1Q9NUN5 540 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 STX8Q9UNK0 236 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
TRAPPC9-205ENST00000518839 DDTLA6NHG4 134 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 PRPF3O43395 683 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 XBP1P17861 261 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 TNNI2P48788 182 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 GRM4Q14833 912 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 ARHGAP27Q6ZUM4 889 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 NBPF11Q86T75 865 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 PHKBQ93100 1093 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 TMEM47Q9BQJ4 181 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 MYOZ2Q9NPC6 264 aa17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 HERC5Q9UII4 1024 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-205ENST00000518839 IGKV6D-41A0A0C4DH26 115 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 AKR1B1P15121 316 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 SH3BP5LQ7L8J4 393 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 SCAND2PQ9GZW5 306 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 MTMR4Q9NYA4 1195 aa17.47■□□□□ 0.39
TRAPPC9-205ENST00000518839 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 TTLL1O95922 423 aa17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 MBD3O95983 291 aa17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 TNFAIP1Q13829 316 aa17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 ZNF396Q96N95 335 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 SYT17Q9BSW7 474 aa17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 CFAP45Q9UL16 551 aa17.46■□□□□ 0.39
TRAPPC9-205ENST00000518839 CLRN2A0PK11 232 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 WNT10BO00744 389 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 PPFIA3O75145 1194 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 GMPSP49915 693 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 PRELPP51888 382 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 FOSBP53539 338 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 FUT2Q10981 343 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 KLHL40Q2TBA0 621 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 KRT40Q6A162 431 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 CSRNP1Q96S65 589 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 VEZTQ9HBM0 779 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 DDX49Q9Y6V7 483 aaKnown RBP17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 ELP1O95163 1332 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 CNTNAP5Q8WYK1 1306 aa17.45■□□□□ 0.38
TRAPPC9-205ENST00000518839 MPHOSPH10O00566 681 aaKnown RBP17.44■□□□□ 0.38
TRAPPC9-205ENST00000518839 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
TRAPPC9-205ENST00000518839 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
TRAPPC9-205ENST00000518839 TMEM179Q6ZVK1 233 aa17.44■□□□□ 0.38
TRAPPC9-205ENST00000518839 MICALL2Q8IY33 904 aa17.44■□□□□ 0.38
TRAPPC9-205ENST00000518839 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
TRAPPC9-205ENST00000518839 CNTNAP1P78357 1384 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 PALM3A6NDB9 673 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 H7C1D1 291 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 TBC1D12O60347 775 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 USP48Q86UV5 1035 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 FAM177A1Q8N128 213 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 GPC2Q8N158 579 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 KANSL2Q9H9L4 492 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 CABP5Q9NP86 173 aa17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 CNOT7Q9UIV1 285 aaKnown RBP17.43■□□□□ 0.38
TRAPPC9-205ENST00000518839 FIBPO43427 364 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms