RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 NYAP1Q6ZVC0 841 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 BICD1Q96G01 975 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 HDAC9Q9UKV0 1011 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 PIK3AP1Q6ZUJ8 805 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 SPATA5Q8NB90 893 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 PARP3Q9Y6F1 533 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 UBXN1Q04323 297 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 CCDC174Q6PII3 467 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 SERTAD1Q9UHV2 236 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 KCNJ14Q9UNX9 436 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 PCDHA5Q9Y5H7 936 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 UIMC1Q96RL1 719 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 TRPC5Q9UL62 973 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 SLIT1O75093 1534 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 NBPF14Q5TI25 921 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 GUCA1BQ9UMX6 200 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
PCDHGA1-202ENST00000517417 NEBLO76041 1014 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 ECM2O94769 699 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 DEXIO95424 95 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 VSTM4Q8IW00 320 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 CCDC42Q96M95 316 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZBTB21Q9ULJ3 1066 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 CTNNA2P26232 953 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 HNRNPH2P55795 449 aaKnown RBP12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 SP4Q02446 784 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 STAMQ92783 540 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 PLS1Q14651 629 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 AIFM3Q96NN9 605 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 BPIFA3Q9BQP9 254 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZNF609O15014 1411 aa12.16□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZMYM6O95789 1325 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 NAPGQ99747 312 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 STX10O60499 249 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 BRD3Q15059 726 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 GBP2P32456 591 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 TUBB4BP68371 445 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 RABGGTAQ92696 567 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 CAPZA3Q96KX2 299 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 PUS3Q9BZE2 481 aaKnown RBP12.15□□□□□ -0.46
PCDHGA1-202ENST00000517417 SHTN1A0MZ66 631 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 ATP8B1O43520 1251 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 ERCC3P19447 782 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 VPS16Q9H269 839 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 EPC1Q9H2F5 836 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.47
PCDHGA1-202ENST00000517417 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 FAM47AQ5JRC9 791 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 PPP6R2O75170 966 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 PARD6BQ9BYG5 372 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 RBM28Q9NW13 759 aaKnown RBP12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 TTF2Q9UNY4 1162 aaKnown RBP12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 LUC7L2Q9Y383 392 aaKnown RBP12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 DLG5Q8TDM6 1919 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 ZBTB22O15209 634 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 ADORA1P30542 326 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 GYG1P46976 350 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 MAATS1Q7Z4T9 603 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 TXKP42681 527 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 TRAF1Q13077 416 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
PCDHGA1-202ENST00000517417 MON2Q7Z3U7 1717 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 USP17L21D6R901 530 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 BCAMP50895 628 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms