RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 BACE1P56817 501 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 OTUD7BQ6GQQ9 843 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 SIAH1Q8IUQ4 282 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 ESYT1Q9BSJ8 1104 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 NBPF3Q9H094 633 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 SAGE1Q9NXZ1 904 aa17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCARNA21-201ENST00000517026 ZMYM6O95789 1325 aa17.33■□□□□ 0.36
SCARNA21-201ENST00000517026 PDE4BQ07343 736 aa17.33■□□□□ 0.36
SCARNA21-201ENST00000517026 FAM47AQ5JRC9 791 aa17.33■□□□□ 0.36
SCARNA21-201ENST00000517026 FASTKD5Q7L8L6 764 aaKnown RBP17.33■□□□□ 0.36
SCARNA21-201ENST00000517026 ANKRD23Q86SG2 305 aa17.33■□□□□ 0.36
SCARNA21-201ENST00000517026 ZNF444Q8N0Y2 327 aaPredicted RBP17.33■□□□□ 0.36
SCARNA21-201ENST00000517026 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 USP17L10C9JJH3 530 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 PDHXO00330 501 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 CDC45O75419 566 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 ALDH1A1P00352 501 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 CRHR2Q13324 411 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 ZYXQ15942 572 aaKnown RBP17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 SH3D19Q5HYK7 790 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 TBC1D10CQ8IV04 446 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 FEZ1Q99689 392 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
SCARNA21-201ENST00000517026 ZNF213O14771 459 aa17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 TFAP4Q01664 338 aa17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 ICA1Q05084 483 aa17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 TAF1CQ15572 869 aaPredicted RBP17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 NKX2-3Q8TAU0 364 aa17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
SCARNA21-201ENST00000517026 C19orf81C9J6K1 198 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 FGRP09769 529 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 EEF2P13639 858 aaKnown RBP17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 PROCA1Q8NCQ7 364 aaPredicted RBP17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 LSG1Q9H089 658 aaKnown RBP17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 KANSL2Q9H9L4 492 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 TMOD4Q9NZQ9 345 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
SCARNA21-201ENST00000517026 IGKV6D-41A0A0C4DH26 115 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 ORC4O43929 436 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 TSPY3P0CV98 308 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 TSPY8P0CW00 308 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 CYP2C8P10632 490 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 KIAA1211Q6ZU35 1233 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 NEDD1Q8NHV4 660 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 STAG1Q8WVM7 1258 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 MAP4K1Q92918 833 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 CFHR5Q9BXR6 569 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 ZFYVE28Q9HCC9 887 aa17.29■□□□□ 0.36
SCARNA21-201ENST00000517026 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 MFSD6Q6ZSS7 791 aa17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 TAF6LQ9Y6J9 622 aa17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
SCARNA21-201ENST00000517026 NEDD4P46934 1319 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 TSPY2A6NKD2 308 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 GPR25O00155 361 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 NMT2O60551 498 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 USP14P54578 494 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 C12orf42Q96LP6 360 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 TMX2Q9Y320 296 aa17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 RBM8AQ9Y5S9 174 aaKnown RBP17.27■□□□□ 0.36
SCARNA21-201ENST00000517026 CYP21A2P08686 494 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 PARK7Q99497 189 aaKnown RBP17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 ASCC2Q9H1I8 757 aaPredicted RBP17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 NYAP2Q9P242 653 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 CPA4Q9UI42 421 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 SLC45A1Q9Y2W3 748 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 HTTP42858 3142 aa17.26■□□□□ 0.35
SCARNA21-201ENST00000517026 TLR2O60603 784 aa17.25■□□□□ 0.35
SCARNA21-201ENST00000517026 VCAM1P19320 739 aa17.25■□□□□ 0.35
SCARNA21-201ENST00000517026 ATAD5Q96QE3 1844 aa17.25■□□□□ 0.35
SCARNA21-201ENST00000517026 PLIN4Q96Q06 1357 aa17.25■□□□□ 0.35
SCARNA21-201ENST00000517026 ADGRA2Q96PE1 1338 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 MKI67P46013 3256 aaKnown RBP17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 B4E1Z4 1266 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms