RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 BCS1LQ9Y276 419 aa23.34■■□□□ 1.33
TRIO-223ENST00000515710 PLIN4Q96Q06 1357 aa23.34■■□□□ 1.33
TRIO-223ENST00000515710 ENTPD3O75355 529 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 NOVP48745 357 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 SPATA32Q96LK8 384 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 AIFM3Q96NN9 605 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 TCHHQ07283 1943 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 FER1L6Q2WGJ9 1857 aa23.33■■□□□ 1.33
TRIO-223ENST00000515710 FUT2Q10981 343 aa23.33■■□□□ 1.32
TRIO-223ENST00000515710 CCDC82Q8N4S0 544 aa23.33■■□□□ 1.32
TRIO-223ENST00000515710 PRMT6Q96LA8 375 aaPredicted RBP23.33■■□□□ 1.32
TRIO-223ENST00000515710 TDRD3Q9H7E2 651 aaKnown RBP23.33■■□□□ 1.32
TRIO-223ENST00000515710 NFKBIEO00221 500 aa23.32■■□□□ 1.32
TRIO-223ENST00000515710 GNAQP50148 359 aa23.32■■□□□ 1.32
TRIO-223ENST00000515710 KIF23Q02241 960 aaPredicted RBP23.32■■□□□ 1.32
TRIO-223ENST00000515710 CAVIN1Q6NZI2 390 aaKnown RBP23.32■■□□□ 1.32
TRIO-223ENST00000515710 CMTR1Q8N1G2 835 aaKnown RBP23.32■■□□□ 1.32
TRIO-223ENST00000515710 TMEM47Q9BQJ4 181 aa23.32■■□□□ 1.32
TRIO-223ENST00000515710 PI4KBQ9UBF8 816 aa23.32■■□□□ 1.32
TRIO-223ENST00000515710 MMP14P50281 582 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 CXCL9Q07325 125 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 DLGAP5Q15398 846 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 CIAPIN1Q6FI81 312 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 ZFPM1Q8IX07 1006 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 LEO1Q8WVC0 666 aaPredicted RBP23.31■■□□□ 1.32
TRIO-223ENST00000515710 GJB4Q9NTQ9 266 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 STX8Q9UNK0 236 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 PLEKHA8P1O95397 391 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 CACNB3P54284 484 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 FOXP4Q8IVH2 680 aaPredicted RBP23.31■■□□□ 1.32
TRIO-223ENST00000515710 CCDC17Q96LX7 622 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 TMOD2Q9NZR1 351 aa23.31■■□□□ 1.32
TRIO-223ENST00000515710 SPDYE2BA6NHP3 402 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 SPDYE6P0CI01 402 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 TOP1P11387 765 aaKnown RBP23.3■■□□□ 1.32
TRIO-223ENST00000515710 XBP1P17861 261 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 GUCY1A2P33402 732 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 TCP10Q12799 353 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 GRM4Q14833 912 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 TNIP1Q15025 636 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 MTMR14Q8NCE2 650 aa23.3■■□□□ 1.32
TRIO-223ENST00000515710 SYAP1Q96A49 352 aaPredicted RBP23.3■■□□□ 1.32
TRIO-223ENST00000515710 ZBTB12Q9Y330 459 aaPredicted RBP23.3■■□□□ 1.32
TRIO-223ENST00000515710 SHMT1P34896 483 aa23.29■■□□□ 1.32
TRIO-223ENST00000515710 SRBD1Q8N5C6 995 aaKnown RBP23.29■■□□□ 1.32
TRIO-223ENST00000515710 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
TRIO-223ENST00000515710 RCOR1Q9UKL0 485 aa23.29■■□□□ 1.32
TRIO-223ENST00000515710 COL2A1P02458 1487 aaPredicted RBP23.29■■□□□ 1.32
TRIO-223ENST00000515710 SAFBQ15424 915 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRIO-223ENST00000515710 PPP4R3BQ5MIZ7 849 aa23.29■■□□□ 1.32
TRIO-223ENST00000515710 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
TRIO-223ENST00000515710 CEP95Q96GE4 821 aa23.29■■□□□ 1.32
TRIO-223ENST00000515710 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRIO-223ENST00000515710 SPON1Q9HCB6 807 aa23.29■■□□□ 1.32
TRIO-223ENST00000515710 V9GY48 417 aaPredicted RBP23.29■■□□□ 1.32
TRIO-223ENST00000515710 CNTNAP5Q8WYK1 1306 aa23.28■■□□□ 1.32
TRIO-223ENST00000515710 IGKV6D-41A0A0C4DH26 115 aa23.28■■□□□ 1.32
TRIO-223ENST00000515710 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
TRIO-223ENST00000515710 AKR1B1P15121 316 aa23.28■■□□□ 1.32
TRIO-223ENST00000515710 U2AF2P26368 475 aaKnown RBP eCLIP23.28■■□□□ 1.324e-6■■□□□ 13.2
TRIO-223ENST00000515710 PKN1Q16512 942 aa23.28■■□□□ 1.32
TRIO-223ENST00000515710 MTMR4Q9NYA4 1195 aa23.28■■□□□ 1.32
TRIO-223ENST00000515710 ATRNL1Q5VV63 1379 aa23.28■■□□□ 1.32
TRIO-223ENST00000515710 UBE2Q2LH0YL09 131 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 MMP1P03956 469 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 GNL2Q13823 731 aaKnown RBP23.27■■□□□ 1.32
TRIO-223ENST00000515710 MYSM1Q5VVJ2 828 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 SH3BP5LQ7L8J4 393 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 LZTS2Q9BRK4 669 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 KIF28PB7ZC32 967 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 METTL16Q86W50 562 aaKnown RBP23.27■■□□□ 1.32
TRIO-223ENST00000515710 USP28Q96RU2 1077 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 TRIM34Q9BYJ4 488 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 RTEL1Q9NZ71 1219 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 TMEM63CQ9P1W3 806 aa23.27■■□□□ 1.32
TRIO-223ENST00000515710 ISY1Q9ULR0 285 aaKnown RBP23.27■■□□□ 1.32
TRIO-223ENST00000515710 GOLGA6L4A6NEF3 574 aa23.26■■□□□ 1.31
TRIO-223ENST00000515710 ZNF70Q9UC06 446 aaPredicted RBP23.26■■□□□ 1.31
TRIO-223ENST00000515710 MAD2L2Q9UI95 211 aa23.26■■□□□ 1.31
TRIO-223ENST00000515710 MYH15Q9Y2K3 1946 aa23.26■■□□□ 1.31
TRIO-223ENST00000515710 PALM3A6NDB9 673 aaPredicted RBP23.25■■□□□ 1.31
TRIO-223ENST00000515710 ZSCAN23Q3MJ62 389 aa23.25■■□□□ 1.31
TRIO-223ENST00000515710 FKBP1CQ5VVH2 108 aa23.25■■□□□ 1.31
TRIO-223ENST00000515710 NLGN2Q8NFZ4 835 aa23.25■■□□□ 1.31
TRIO-223ENST00000515710 RPS12P25398 132 aaKnown RBP23.25■■□□□ 1.31
TRIO-223ENST00000515710 ZNF445P59923 1031 aa23.25■■□□□ 1.31
TRIO-223ENST00000515710 SPDYE2Q495Y8 402 aa23.25■■□□□ 1.31
TRIO-223ENST00000515710 FOXP1Q9H334 677 aaPredicted RBP23.25■■□□□ 1.31
TRIO-223ENST00000515710 TATDN1Q6P1N9 297 aa23.24■■□□□ 1.31
TRIO-223ENST00000515710 FAM151AQ8WW52 585 aa23.24■■□□□ 1.31
TRIO-223ENST00000515710 DNAJC18Q9H819 358 aa23.24■■□□□ 1.31
TRIO-223ENST00000515710 POLR3EQ9NVU0 708 aa23.24■■□□□ 1.31
TRIO-223ENST00000515710 TTLL1O95922 423 aa23.23■■□□□ 1.31
TRIO-223ENST00000515710 STAG2Q8N3U4 1231 aa23.23■■□□□ 1.31
TRIO-223ENST00000515710 GOLGA6L3A6NEY3 463 aa23.23■■□□□ 1.31
TRIO-223ENST00000515710 YEATS4O95619 227 aa23.23■■□□□ 1.31
TRIO-223ENST00000515710 SMARCA1P28370 1054 aa23.23■■□□□ 1.31
TRIO-223ENST00000515710 CEBPZQ03701 1054 aaKnown RBP23.23■■□□□ 1.31
TRIO-223ENST00000515710 PFKFB3Q16875 520 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms