RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 C11orf49Q9H6J7 331 aa22.39■■□□□ 1.17
SPOP-220ENST00000515508 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
SPOP-220ENST00000515508 USP17L15C9J2P7 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L13C9JLJ4 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L11C9JVI0 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L18D6R9N7 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L22D6RA61 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L17D6RBQ6 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L19D6RCP7 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L20D6RJB6 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 CNMDO75829 334 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 BMP8BP34820 402 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP14P54578 494 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 CACNB2Q08289 660 aaPredicted RBP22.38■■□□□ 1.17
SPOP-220ENST00000515508 USP17L24Q0WX57 530 aa22.38■■□□□ 1.17
SPOP-220ENST00000515508 CCAR1Q8IX12 1150 aaKnown RBP22.38■■□□□ 1.17
SPOP-220ENST00000515508 PFASO15067 1338 aa22.37■■□□□ 1.17
SPOP-220ENST00000515508 SOX1O00570 391 aaPredicted RBP22.37■■□□□ 1.17
SPOP-220ENST00000515508 VCAM1P19320 739 aa22.37■■□□□ 1.17
SPOP-220ENST00000515508 SHMT1P34896 483 aa22.37■■□□□ 1.17
SPOP-220ENST00000515508 ZYXQ15942 572 aaKnown RBP22.37■■□□□ 1.17
SPOP-220ENST00000515508 CCL14Q16627 93 aa22.37■■□□□ 1.17
SPOP-220ENST00000515508 ABCB5Q2M3G0 1257 aa22.37■■□□□ 1.17
SPOP-220ENST00000515508 CERKLQ49MI3 558 aaPredicted RBP22.37■■□□□ 1.17
SPOP-220ENST00000515508 LBX2Q6XYB7 198 aa22.37■■□□□ 1.17
SPOP-220ENST00000515508 COL6A3P12111 3177 aa22.36■■□□□ 1.17
SPOP-220ENST00000515508 COL6A1P12109 1028 aa22.36■■□□□ 1.17
SPOP-220ENST00000515508 RAB3GAP1Q15042 981 aa22.36■■□□□ 1.17
SPOP-220ENST00000515508 CATSPERGQ6ZRH7 1159 aa22.36■■□□□ 1.17
SPOP-220ENST00000515508 A0A0G2JMZ2 1700 aa22.36■■□□□ 1.17
SPOP-220ENST00000515508 PLCD1P51178 756 aa22.35■■□□□ 1.17
SPOP-220ENST00000515508 CCNA1P78396 465 aa22.35■■□□□ 1.17
SPOP-220ENST00000515508 GABPAQ06546 454 aa22.35■■□□□ 1.17
SPOP-220ENST00000515508 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
SPOP-220ENST00000515508 HSP90AB4PQ58FF6 505 aa22.35■■□□□ 1.17
SPOP-220ENST00000515508 ACER1Q8TDN7 264 aa22.35■■□□□ 1.17
SPOP-220ENST00000515508 ZMYND8Q9ULU4 1186 aaPredicted RBP22.35■■□□□ 1.17
SPOP-220ENST00000515508 ZNF236Q9UL36 1845 aa22.35■■□□□ 1.17
SPOP-220ENST00000515508 CCND3P30281 292 aaPredicted RBP22.34■■□□□ 1.17
SPOP-220ENST00000515508 GUCY1A2P33402 732 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 MAP2K5Q13163 448 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 LHX8Q68G74 356 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 RHPN1Q8TCX5 695 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 PANK1Q8TE04 598 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 IL1RAPL2Q9NP60 686 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 CABP5Q9NP86 173 aa22.34■■□□□ 1.17
SPOP-220ENST00000515508 DNAH12Q6ZR08 3092 aa22.33■■□□□ 1.17
SPOP-220ENST00000515508 MAGEB6P1A0A0J9YX57 407 aa22.33■■□□□ 1.17
SPOP-220ENST00000515508 GLRX3O76003 335 aaKnown RBP22.33■■□□□ 1.17
SPOP-220ENST00000515508 PDE6AP16499 860 aa22.33■■□□□ 1.17
SPOP-220ENST00000515508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.33■■□□□ 1.17
SPOP-220ENST00000515508 LRCH3Q96II8 777 aa22.33■■□□□ 1.17
SPOP-220ENST00000515508 MYH8P13535 1937 aa22.33■■□□□ 1.16
SPOP-220ENST00000515508 RLFQ13129 1914 aa22.33■■□□□ 1.16
SPOP-220ENST00000515508 SPDYE16A6NNV3 312 aaPredicted RBP22.32■■□□□ 1.16
SPOP-220ENST00000515508 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
SPOP-220ENST00000515508 CRNKL1Q9BZJ0 848 aaKnown RBP22.32■■□□□ 1.16
SPOP-220ENST00000515508 CWC22Q9HCG8 908 aaKnown RBP22.32■■□□□ 1.16
SPOP-220ENST00000515508 BTBD7Q9P203 1132 aa22.32■■□□□ 1.16
SPOP-220ENST00000515508 ZBED9Q6R2W3 1325 aa22.31■■□□□ 1.16
SPOP-220ENST00000515508 SLC15A5A6NIM6 579 aa22.31■■□□□ 1.16
SPOP-220ENST00000515508 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
SPOP-220ENST00000515508 HOXC6P09630 235 aa22.31■■□□□ 1.16
SPOP-220ENST00000515508 SYN1P17600 705 aa22.31■■□□□ 1.16
SPOP-220ENST00000515508 PTPREP23469 700 aa22.31■■□□□ 1.16
SPOP-220ENST00000515508 GRB14Q14449 540 aa22.31■■□□□ 1.16
SPOP-220ENST00000515508 EDC3Q96F86 508 aaKnown RBP22.31■■□□□ 1.16
SPOP-220ENST00000515508 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
SPOP-220ENST00000515508 TCRBV5S4A2TA0A5A2 114 aa22.3■■□□□ 1.16
SPOP-220ENST00000515508 MAGEA10P43363 369 aaPredicted RBP22.3■■□□□ 1.16
SPOP-220ENST00000515508 KIF1BPQ96EK5 621 aa22.3■■□□□ 1.16
SPOP-220ENST00000515508 FLRT1Q9NZU1 646 aa22.3■■□□□ 1.16
SPOP-220ENST00000515508 ZNF532Q9HCE3 1301 aa22.3■■□□□ 1.16
SPOP-220ENST00000515508 EVX2Q03828 476 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 SEPT2Q15019 361 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 MFSD14CQ5VZR4 134 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 GPR153Q6NV75 609 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 CLASRPQ8N2M8 674 aaKnown RBP22.29■■□□□ 1.16
SPOP-220ENST00000515508 DCP1AQ9NPI6 582 aaPredicted RBP22.29■■□□□ 1.16
SPOP-220ENST00000515508 MCM9Q9NXL9 1143 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 IVNS1ABPQ9Y6Y0 642 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 PARP14Q460N5 1801 aa22.29■■□□□ 1.16
SPOP-220ENST00000515508 A0A1W2PRG0 241 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 IGHA2P01877 340 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 LRIT3Q3SXY7 679 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 WDR78Q5VTH9 848 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 RPAP2Q8IXW5 612 aaPredicted RBP22.28■■□□□ 1.16
SPOP-220ENST00000515508 TDHQ8IZJ6 230 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 LCORLQ8N3X6 602 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 SDR42E1Q8WUS8 393 aa22.28■■□□□ 1.16
SPOP-220ENST00000515508 MYH7P12883 1935 aa22.27■■□□□ 1.16
SPOP-220ENST00000515508 GOLIM4O00461 696 aa22.27■■□□□ 1.16
SPOP-220ENST00000515508 MS4A1P11836 297 aa22.27■■□□□ 1.16
SPOP-220ENST00000515508 LRRC26Q2I0M4 334 aa22.27■■□□□ 1.16
SPOP-220ENST00000515508 MIER1Q8N108 512 aa22.27■■□□□ 1.16
SPOP-220ENST00000515508 DNAJC2Q99543 621 aaKnown RBP22.27■■□□□ 1.16
SPOP-220ENST00000515508 BAZ2AQ9UIF9 1905 aaKnown RBP22.27■■□□□ 1.16
SPOP-220ENST00000515508 MSCO60682 206 aa22.26■■□□□ 1.15
SPOP-220ENST00000515508 NPLOC4Q8TAT6 608 aa22.26■■□□□ 1.15
SPOP-220ENST00000515508 DDX20Q9UHI6 824 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms