RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DIS3L2Q8IYB7 885 aaKnown RBP17.82■□□□□ 0.44
TRIM41-207ENST00000515223 EDC4Q6P2E9 1401 aaKnown RBP17.82■□□□□ 0.44
TRIM41-207ENST00000515223 ATP2B4P23634 1241 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 GCKRQ14397 625 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 GSDMBQ8TAX9 411 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 EXOC3O60645 756 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 ZNF569Q5MCW4 686 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 C10orf67Q8IYJ2 551 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 IPO4Q8TEX9 1081 aaKnown RBP17.82■□□□□ 0.44
TRIM41-207ENST00000515223 STIM2Q9P246 746 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 ERVK-7P63135 1459 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 PRPF6O94906 941 aaKnown RBP17.81■□□□□ 0.44
TRIM41-207ENST00000515223 GABPAQ06546 454 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 TRIM14Q14142 442 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 CLUL1Q15846 466 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 TFAP4Q01664 338 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 ARPP21Q9UBL0 812 aaPredicted RBP17.81■□□□□ 0.44
TRIM41-207ENST00000515223 NLGN1Q8N2Q7 840 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 TUBBP07437 444 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 CALCRLQ16602 461 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 ANO1Q5XXA6 986 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 DCUN1D2Q6PH85 259 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 CSGALNACT2Q8N6G5 542 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 CTNND2Q9UQB3 1225 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 KRBA2Q6ZNG9 492 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 EP400NLQ6ZTU2 488 aa17.81■□□□□ 0.44
TRIM41-207ENST00000515223 YWHAEP62258 255 aaKnown RBP17.8■□□□□ 0.44
TRIM41-207ENST00000515223 ZNF365Q70YC5 407 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 IFT81Q8WYA0 676 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 CFAP57Q96MR6 1250 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 PFDN4Q9NQP4 134 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 IWS1Q96ST2 819 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 AOX1Q06278 1338 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 AKR1B15C9JRZ8 316 aaPredicted RBP17.8■□□□□ 0.44
TRIM41-207ENST00000515223 CNGA1P29973 690 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 CARD6Q9BX69 1037 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 KCNK9Q9NPC2 374 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 KCNH3Q9ULD8 1083 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 SMIM23A6NLE4 172 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 REXO1Q8N1G1 1221 aaKnown RBP17.8■□□□□ 0.44
TRIM41-207ENST00000515223 CCDC110Q8TBZ0 833 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 ZNF496Q96IT1 587 aaPredicted RBP17.8■□□□□ 0.44
TRIM41-207ENST00000515223 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
TRIM41-207ENST00000515223 PPP2R3AQ06190 1150 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 ASIC2Q16515 512 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 TRPC5Q9UL62 973 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-207ENST00000515223 PTH1RQ03431 593 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 UBL4BQ8N7F7 174 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 MKRN1Q9UHC7 482 aaKnown RBP17.79■□□□□ 0.44
TRIM41-207ENST00000515223 ZNF532Q9HCE3 1301 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 TPD52P55327 224 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-207ENST00000515223 DEPTORQ8TB45 409 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 ZWINTO95229 277 aa17.79■□□□□ 0.44
TRIM41-207ENST00000515223 BAG1Q99933 345 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-207ENST00000515223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM41-207ENST00000515223 GAS7O60861 476 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 CUTAO60888 179 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 IVLP07476 585 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 BCRP11274 1271 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 GTF2A1P52655 376 aaPredicted RBP17.78■□□□□ 0.44
TRIM41-207ENST00000515223 UAP1Q16222 522 aaPredicted RBP17.78■□□□□ 0.44
TRIM41-207ENST00000515223 ATP8A2Q9NTI2 1148 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 ATP5DP30049 168 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 ARHGEF16Q5VV41 709 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 ZBTB8OSQ8IWT0 167 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 NT5C3AQ9H0P0 336 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 NKIRAS1Q9NYS0 192 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 ATP10AO60312 1499 aa17.78■□□□□ 0.44
TRIM41-207ENST00000515223 GCNT3O95395 438 aa17.77■□□□□ 0.44
TRIM41-207ENST00000515223 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.44
TRIM41-207ENST00000515223 ACTN4O43707 911 aaKnown RBP17.77■□□□□ 0.44
TRIM41-207ENST00000515223 CTDSPL2Q05D32 466 aa17.77■□□□□ 0.44
TRIM41-207ENST00000515223 RNF169Q8NCN4 708 aa17.77■□□□□ 0.44
TRIM41-207ENST00000515223 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
TRIM41-207ENST00000515223 PALM3A6NDB9 673 aaPredicted RBP17.77■□□□□ 0.44
TRIM41-207ENST00000515223 ZAP70P43403 619 aa17.77■□□□□ 0.44
TRIM41-207ENST00000515223 FANCCQ00597 558 aa17.77■□□□□ 0.44
TRIM41-207ENST00000515223 PRPF31Q8WWY3 499 aaKnown RBP17.77■□□□□ 0.44
TRIM41-207ENST00000515223 FAM193BQ96PV7 902 aaPredicted RBP17.77■□□□□ 0.44
TRIM41-207ENST00000515223 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
TRIM41-207ENST00000515223 MIER3Q7Z3K6 550 aa17.77■□□□□ 0.43
TRIM41-207ENST00000515223 METTL13Q8N6R0 699 aa17.77■□□□□ 0.43
TRIM41-207ENST00000515223 MRPL11Q9Y3B7 192 aaKnown RBP17.77■□□□□ 0.43
TRIM41-207ENST00000515223 CEP170Q5SW79 1584 aa17.77■□□□□ 0.43
TRIM41-207ENST00000515223 SIRT2Q8IXJ6 389 aa17.77■□□□□ 0.43
TRIM41-207ENST00000515223 ADPGKQ9BRR6 497 aa17.77■□□□□ 0.43
TRIM41-207ENST00000515223 NUP58Q9BVL2 599 aa17.77■□□□□ 0.43
TRIM41-207ENST00000515223 VPS16Q9H269 839 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms